IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2252	 40.00	-1	2740031..2740225	-	64	157962082	-	Spea_2261	-	50S ribosomal protein L35
2253	 43.61	0	2740313..2740789	-	158	157962083	-	Spea_2262	-	translation initiation factor IF-3
2254	 44.22	0	2740859..2742787	-	642	157962084	-	Spea_2263	-	threonyl-tRNA synthetase
2255	 41.20	-1	2743074..2743340	+	88	157962085	-	Spea_2264	-	hypothetical protein
2256	 47.02	0	2743471..2744208	+	245	157962086	-	Spea_2265	-	short-chain dehydrogenase/reductase SDR
2257	 41.79	-1	2744211..2744411	+	66	157962087	-	Spea_2266	-	hypothetical protein
2258	 42.23	0	2744451..2745068	-	205	157962088	-	Spea_2267	-	riboflavin synthase subunit alpha
2259	 45.40	0	2745103..2746461	+	452	157962089	-	Spea_2268	-	MATE efflux family protein
2260	 40.74	-1	2746572..2746706	+	44	157962090	-	Spea_2269	-	transposase
2261	 47.08	0	2746961..2747440	+	159	157962091	-	Spea_2270	-	PEBP family protein
2262	 39.00	-1	2747821..2749002	-	393	157962092	-	Spea_2271	-	hypothetical protein
2263	 48