IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1947	 44.21	0	2377189..2379018	+	609	157961777	-	Spea_1954	-	excinuclease ABC subunit C
1948	 42.99	0	2379066..2379614	+	182	157961778	-	Spea_1955	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
1949	 41.93	0	2380631..2381200	+	189	157961779	-	Spea_1956	-	hypothetical protein
1950	 43.58	0	2381364..2382719	+	451	157961780	-	Spea_1957	-	peptidoglycan binding domain-containing protein
1951	 42.99	0	2382849..2383397	+	182	157961781	-	Spea_1958	-	hypothetical protein
1952	 42.71	0	2383547..2383834	+	95	157961782	-	Spea_1959	-	ribosomal protein L25
1953	 41.19	-1	2383910..2385424	-	504	157961783	-	Spea_1960	-	hypothetical protein
1954	 42.40	0	2385434..2386702	-	422	157961784	-	Spea_1961	-	hypothetical protein
1955	 42.53	0	2386754..2388688	-	644	157961785	-	Spea_1962	-	putative serine protein kinase, PrkA
1956	 42.91	0	2388916..2389500	-	194	157961786	-	Spea_1963	-	superoxide dismutase
1957	 43.57	0	2389726..2390067	+	113	157961787