IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1933	 40.81	-1	2354556..2355572	+	338	157961763	-	Spea_1940	-	BNR repeat-containing protein
1934	 43.45	0	2355585..2357888	+	767	157961764	-	Spea_1941	-	Patched family protein
1935	 43.03	0	2358150..2362994	+	1614	157961765	-	Spea_1942	-	NAD-glutamate dehydrogenase
1936	 39.61	-1	2363054..2364073	+	339	157961766	-	Spea_1943	-	dihydroorotate dehydrogenase 2
1937	 38.89	-1	2364247..2364786	+	179	157961767	-	Spea_1944	-	hypothetical protein
1938	 39.27	-1	2365103..2365708	-	201	157961768	-	Spea_1945	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
1939	 42.04	0	2366975..2369110	+	711	157961769	-	Spea_1946	-	23S rRNA m(2)G2445 methyltransferase
1940	 40.51	-1	2369100..2369336	+	78	157961770	-	Spea_1947	-	glutaredoxin 2
1941	 44.07	0	2369338..2371275	+	645	157961771	-	Spea_1948	-	ABC transporter ATPase component
1942	 41.52	-1	2371305..2373161	+	618	157961772	-	Spea_1949	-	hypothetical protein
1943	 41.24	-1	2373357..2373533	+	58	157961773	-	Spea_