IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1927	 42.41	0	2345083..2345721	+	212	157961757	-	Spea_1934	-	putative solute/DNA competence effector
1928	 42.77	0	2345755..2347800	+	681	157961758	-	Spea_1935	-	carboxy-terminal protease
1929	 41.69	-1	2347873..2350434	+	853	157961759	-	Spea_1936	-	aminopeptidase N
1930	 39.83	-1	2350522..2350752	+	76	157961760	-	Spea_1937	-	hypothetical protein
1931	 44.85	0	2351070..2353118	+	682	157961761	-	Spea_1938	-	hypothetical protein
1932	 44.69	0	2353138..2354502	+	454	157961762	-	Spea_1939	-	hypothetical protein
1933	 40.81	-1	2354556..2355572	+	338	157961763	-	Spea_1940	-	BNR repeat-containing protein
1934	 43.45	0	2355585..2357888	+	767	157961764	-	Spea_1941	-	Patched family protein
1935	 43.03	0	2358150..2362994	+	1614	157961765	-	Spea_1942	-	NAD-glutamate dehydrogenase
1936	 39.61	-1	2363054..2364073	+	339	157961766	-	Spea_1943	-	dihydroorotate dehydrogenase 2
1937	 38.89	-1	2364247..2364786	+	179	157961767	-	Spea_1944	-	hypothetical protein
1938	 3