IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1912	 45.13	0	2331226..2331861	+	211	157961742	-	Spea_1919	-	uridine kinase
1913	 44.14	0	2331896..2332117	+	73	157961743	-	Spea_1920	-	deoxycytidine triphosphate deaminase
1914	 44.96	0	2332117..2333019	+	300	157961744	-	Spea_1921	-	aminodeoxychorismate lyase
1915	 44.35	0	2333016..2334023	+	335	157961745	-	Spea_1922	-	aminodeoxychorismate lyase
1916	 48.06	0	2334020..2334664	+	214	157961746	-	Spea_1923	-	dTMP kinase
1917	 45.10	0	2334666..2335583	+	305	157961747	-	Spea_1924	-	DNA polymerase III, delta prime subunit
1918	 45.26	0	2335590..2335916	+	108	157961748	-	Spea_1925	-	type IV pilus biogenesis protein PilZ
1919	 43.73	0	2335962..2336750	+	262	157961749	-	Spea_1926	-	TatD family hydrolase
1920	 44.38	0	2336976..2338442	-	488	157961750	-	Spea_1927	-	rRNA (cytosine-C(5)-)-methyltransferase RsmF
1921	 45.56	0	2338532..2339758	+	408	157961751	-	Spea_1928	-	nucleoside recognition domain-containing protein
1922	 43.98	0	2339909..2342539	-	876	15796175