IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1904	 46.40	0	2321049..2322770	-	573	157961734	-	Spea_1911	-	acetolactate synthase, large subunit, biosynthetic type
1905	 46.05	0	2323131..2324357	-	408	157961735	-	Spea_1912	-	Bcr/CflA subfamily drug resistance transporter
1906	 47.25	0	2325153..2325497	-	114	157961736	-	Spea_1913	-	hypothetical protein
1907	 44.22	0	2325746..2326498	+	250	157961737	-	Spea_1914	-	hypothetical protein
1908	 41.60	-1	2326597..2326995	+	132	157961738	-	Spea_1915	-	transposase
1909	 39.71	-1	2327079..2327831	+	250	157961739	-	Spea_1916	-	integrase catalytic region
1910	 45.20	0	2327899..2329938	-	679	157961740	-	Spea_1917	-	methionyl-tRNA synthetase
1911	 45.88	0	2330099..2331214	+	371	157961741	-	Spea_1918	-	ATP-binding Mrp/Nbp35 family protein
1912	 45.13	0	2331226..2331861	+	211	157961742	-	Spea_1919	-	uridine kinase
1913	 44.14	0	2331896..2332117	+	73	157961743	-	Spea_1920	-	deoxycytidine triphosphate deaminase
1914	 44.96	0	2332117..2333019	+	300	157961744	-	Spe