IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1893	 44.12	0	2311491..2312213	+	240	157961723	-	Spea_1900	-	MscS mechanosensitive ion channel
1894	 43.81	0	2312303..2313247	+	314	157961724	-	Spea_1901	-	response regulator receiver modulated CheW protein
1895	 41.40	-1	2313309..2313953	-	214	157961725	-	Spea_1902	-	hypothetical protein
1896	 45.00	0	2314040..2314399	-	119	157961726	-	Spea_1903	-	hypothetical protein
1897	 47.94	0	2314764..2315954	+	396	157961727	-	Spea_1904	-	lytic murein transglycosylase
1898	 46.38	0	2316083..2316565	+	160	157961728	-	Spea_1905	-	peptidylprolyl isomerase FKBP-type
1899	 41.10	-1	2316639..2316857	+	72	157961729	-	Spea_1906	-	hypothetical protein
1900	 46.84	0	2316970..2317650	+	226	157961730	-	Spea_1907	-	carboxylesterase
1901	 42.99	0	2318021..2319739	+	572	157961731	-	Spea_1908	-	bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor
1902	 43.31	0	2320035..2320475	+	146	157961732	-	Spea_1909	-	heat shock protein Hsp20
1903	 45.25	0	2320555..2321049	-	164