IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1883	 41.08	-1	2298749..2299174	-	141	157961713	-	Spea_1890	-	hypothetical protein
1884	 40.10	-1	2299645..2299851	-	68	157961714	-	Spea_1891	-	XRE family transcriptional regulator
1885	 38.70	-1	2299980..2300519	+	179	157961715	-	Spea_1892	-	hypothetical protein
1886	 38.20	-2	2300525..2301943	+	472	157961716	-	Spea_1893	-	type III restriction protein res subunit
1887	 38.01	-2	2302098..2302910	-	270	157961717	-	Spea_1894	-	hypothetical protein
1888	 40.50	-1	2303250..2303528	-	92	157961718	-	Spea_1895	-	hypothetical protein
1889	 39.58	-1	2304868..2305251	-	127	157961719	-	Spea_1896	-	hypothetical protein
1890	 40.97	-1	2305253..2307295	-	680	157961720	-	Spea_1897	-	integrase family protein
1891	 39.39	-1	2307295..2309985	-	896	157961721	-	Spea_1898	-	hypothetical protein
1892	 40.58	-1	2309986..2311365	-	459	157961722	-	Spea_1899	-	integrase family protein
1893	 44.12	0	2311491..2312213	+	240	157961723	-	Spea_1900	-	MscS mechanosensitive ion cha