IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1869	 46.11	0	2286427..2287326	+	299	157961699	-	Spea_1875	-	LysR family transcriptional regulator
1870	 41.67	-1	2287728..2288087	+	119	157961700	-	Spea_1876	-	hypothetical protein
1871	 46.63	0	2288240..2289232	-	330	157961701	-	Spea_1877	-	cytochrome-c peroxidase
1872	 42.86	0	2289486..2289716	-	76	157961702	-	Spea_1878	-	integral membrane protein TerC
1873	 44.32	0	2289976..2290767	+	263	157961703	-	Spea_1879	-	ABC transporter
1874	 43.57	0	2290918..2291757	+	279	157961704	-	Spea_1880	-	alpha/beta hydrolase fold
1875	 44.85	0	2291767..2292174	-	135	157961705	-	Spea_1881	-	hypothetical protein
1876	 43.36	0	2292552..2293469	+	305	157961706	-	Spea_1882	-	hypothetical protein
1877	 47.22	0	2293491..2293634	+	47	157961707	-	Spea_1883	-	hypothetical protein
1878	 35.06	-2	2294204..2294377	-	57	157961708	-	Spea_1884	-	hypothetical protein
1879	 43.43	0	2294882..2295772	+	296	157961709	-	Spea_1885	-	MscS mechanosensitive ion channel
1880	 38.42	-2	229