IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1859	 42.18	0	2274200..2275420	+	406	157961689	-	Spea_1865	-	hypothetical protein
1860	 44.95	0	2275491..2275817	-	108	157961690	-	Spea_1866	-	hypothetical protein
1861	 43.15	0	2275913..2276248	-	111	157961691	-	Spea_1867	-	hypothetical protein
1862	 39.15	-1	2276507..2276884	-	125	157961692	-	Spea_1868	-	hypothetical protein
1863	 47.18	0	2276940..2277560	-	206	157961693	-	Spea_1869	-	lysine exporter protein LysE/YggA
1864	 35.78	-2	2278702..2279517	+	271	157961694	-	Spea_1870	-	hypothetical protein
1865	 35.87	-2	2279689..2281341	+	550	157961695	-	Spea_1871	-	hypothetical protein
1866	 33.96	-2	2281416..2283173	+	585	157961696	-	Spea_1872	-	hypothetical protein
1867	 43.32	0	2283981..2285021	-	346	157961697	-	Spea_1873	-	4-hydroxyphenylpyruvate dioxygenase
1868	 46.60	0	2285111..2286271	-	386	157961698	-	Spea_1874	-	homogentisate 12-dioxygenase
1869	 46.11	0	2286427..2287326	+	299	157961699	-	Spea_1875	-	LysR family transcriptional regulator
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