IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1854	 47.56	0	2264244..2265818	+	524	157961684	-	Spea_1860	-	methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
1855	 46.71	0	2266076..2267017	-	313	157961685	-	Spea_1861	-	transporter DMT superfamily protein
1856	 45.88	0	2268123..2270522	+	799	157961686	-	Spea_1862	-	TonB-dependent receptor plug
1857	 48.92	+1	2270984..2271952	-	322	157961687	-	Spea_1863	-	ribonucleoside hydrolase 1
1858	 49.56	+1	2272206..2274005	-	599	157961688	-	Spea_1864	-	gamma-glutamyltransferase
1859	 42.18	0	2274200..2275420	+	406	157961689	-	Spea_1865	-	hypothetical protein
1860	 44.95	0	2275491..2275817	-	108	157961690	-	Spea_1866	-	hypothetical protein
1861	 43.15	0	2275913..2276248	-	111	157961691	-	Spea_1867	-	hypothetical protein
1862	 39.15	-1	2276507..2276884	-	125	157961692	-	Spea_1868	-	hypothetical protein
1863	 47.18	0	2276940..2277560	-	206	157961693	-	Spea_1869	-	lysine exporter protein LysE/YggA
1864	 35.78	-2	2278702..2279517	+	271	157961694