IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1827	 47.72	0	2232132..2232680	+	182	157961657	-	Spea_1833	-	nitroreductase
1828	 46.00	0	2232804..2233403	+	199	157961658	-	Spea_1834	-	GCN5-related N-acetyltransferase
1829	 48.40	0	2233617..2234021	+	134	157961659	-	Spea_1835	-	hypothetical protein
1830	 43.33	0	2234294..2234683	+	129	157961660	-	Spea_1836	-	hypothetical protein
1831	 46.72	0	2235133..2235819	+	228	157961661	-	Spea_1837	-	ABC transporter related
1832	 44.96	0	2235809..2236900	+	363	157961662	-	Spea_1838	-	multidrug resistance efflux pump-like protein
1833	 47.04	0	2236897..2238063	+	388	157961663	-	Spea_1839	-	membrane-fusion protein
1834	 46.05	0	2238060..2239349	+	429	157961664	-	Spea_1840	-	membrane-fusion protein
1835	 48.17	0	2239346..2240659	+	437	157961665	-	Spea_1841	-	hypothetical protein
1836	 45.30	0	2240933..2241559	+	208	157961666	-	Spea_1842	-	Ion transport 2 domain-containing protein
1837	 47.14	0	2241570..2242721	+	383	157961667	-	Spea_1843	-	hypothetical protein