IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1823	 39.08	-1	2228890..2229150	+	86	157961653	-	Spea_1829	-	hypothetical protein
1824	 44.95	0	2229271..2229933	+	220	157961654	-	Spea_1830	-	nicotinamide mononucleotide transporter PnuC
1825	 46.42	0	2229934..2230995	+	353	157961655	-	Spea_1831	-	aminoglycoside phosphotransferase
1826	 44.44	0	2231316..2231909	+	197	157961656	-	Spea_1832	-	DoxX family protein
1827	 47.72	0	2232132..2232680	+	182	157961657	-	Spea_1833	-	nitroreductase
1828	 46.00	0	2232804..2233403	+	199	157961658	-	Spea_1834	-	GCN5-related N-acetyltransferase
1829	 48.40	0	2233617..2234021	+	134	157961659	-	Spea_1835	-	hypothetical protein
1830	 43.33	0	2234294..2234683	+	129	157961660	-	Spea_1836	-	hypothetical protein
1831	 46.72	0	2235133..2235819	+	228	157961661	-	Spea_1837	-	ABC transporter related
1832	 44.96	0	2235809..2236900	+	363	157961662	-	Spea_1838	-	multidrug resistance efflux pump-like protein
1833	 47.04	0	2236897..2238063	+	388	157961663	-	Spea_1839	-	membrane-fu