IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1817	 44.69	0	2223974..2224387	-	137	157961647	-	Spea_1823	-	TetR family transcriptional regulator
1818	 43.98	0	2224584..2224940	+	118	157961648	-	Spea_1824	-	histidine triad (HIT) protein
1819	 46.15	0	2224937..2225443	+	168	157961649	-	Spea_1825	-	thioesterase superfamily protein
1820	 43.79	0	2225430..2225936	+	168	157961650	-	Spea_1826	-	thioesterase superfamily protein
1821	 46.41	0	2225993..2226382	+	129	157961651	-	Spea_1827	-	hypothetical protein
1822	 45.68	0	2226691..2228829	+	712	157961652	-	Spea_1828	-	TonB-dependent receptor
1823	 39.08	-1	2228890..2229150	+	86	157961653	-	Spea_1829	-	hypothetical protein
1824	 44.95	0	2229271..2229933	+	220	157961654	-	Spea_1830	-	nicotinamide mononucleotide transporter PnuC
1825	 46.42	0	2229934..2230995	+	353	157961655	-	Spea_1831	-	aminoglycoside phosphotransferase
1826	 44.44	0	2231316..2231909	+	197	157961656	-	Spea_1832	-	DoxX family protein
1827	 47.72	0	2232132..2232680	+	182	157961657	-	Spea