IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1812	 43.94	0	2221171..2221632	+	153	157961642	-	Spea_1818	-	hypothetical protein
1813	 44.61	0	2221645..2222052	+	135	157961643	-	Spea_1819	-	curli production assembly/transport component CsgF precursor
1814	 46.64	0	2222055..2222903	+	282	157961644	-	Spea_1820	-	curli production assembly/transport component CsgG
1815	 42.77	0	2223106..2223444	+	112	157961645	-	Spea_1821	-	hypothetical protein
1816	 40.68	-1	2223553..2223906	+	117	157961646	-	Spea_1822	-	hypothetical protein
1817	 44.69	0	2223974..2224387	-	137	157961647	-	Spea_1823	-	TetR family transcriptional regulator
1818	 43.98	0	2224584..2224940	+	118	157961648	-	Spea_1824	-	histidine triad (HIT) protein
1819	 46.15	0	2224937..2225443	+	168	157961649	-	Spea_1825	-	thioesterase superfamily protein
1820	 43.79	0	2225430..2225936	+	168	157961650	-	Spea_1826	-	thioesterase superfamily protein
1821	 46.41	0	2225993..2226382	+	129	157961651	-	Spea_1827	-	hypothetical protein
1822	 45.68	0	2226691..2228829	+	712