IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1805	 45.43	0	2212030..2214699	+	889	157961635	-	Spea_1811	-	nitrite reductase (NAD(P)H), large subunit
1806	 45.41	0	2214696..2215076	+	126	157961636	-	Spea_1812	-	nitrite reductase (NAD(P)H), small subunit
1807	 45.94	0	2215078..2216544	+	488	157961637	-	Spea_1813	-	nitrite transporter
1808	 43.44	0	2216549..2218339	+	596	157961638	-	Spea_1814	-	serine/threonine protein kinase
1809	 38.67	-1	2218439..2219581	+	380	157961639	-	Spea_1815	-	TPR repeat-containing protein
1810	 42.75	0	2219874..2220425	+	183	157961640	-	Spea_1816	-	curlin-associated protein
1811	 42.45	0	2220539..2221174	+	211	157961641	-	Spea_1817	-	LuxR family transcriptional regulator
1812	 43.94	0	2221171..2221632	+	153	157961642	-	Spea_1818	-	hypothetical protein
1813	 44.61	0	2221645..2222052	+	135	157961643	-	Spea_1819	-	curli production assembly/transport component CsgF precursor
1814	 46.64	0	2222055..2222903	+	282	157961644	-	Spea_1820	-	curli production assembly/transport component CsgG
1815	 42.77	0	2223106..2223444	+	112