version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1805 45.43 0 2212030..2214699 + 889 157961635 - Spea_1811 - nitrite reductase (NAD(P)H), large subunit 1806 45.41 0 2214696..2215076 + 126 157961636 - Spea_1812 - nitrite reductase (NAD(P)H), small subunit 1807 45.94 0 2215078..2216544 + 488 157961637 - Spea_1813 - nitrite transporter 1808 43.44 0 2216549..2218339 + 596 157961638 - Spea_1814 - serine/threonine protein kinase 1809 38.67 -1 2218439..2219581 + 380 157961639 - Spea_1815 - TPR repeat-containing protein 1810 42.75 0 2219874..2220425 + 183 157961640 - Spea_1816 - curlin-associated protein 1811 42.45 0 2220539..2221174 + 211 157961641 - Spea_1817 - LuxR family transcriptional regulator 1812 43.94 0 2221171..2221632 + 153 157961642 - Spea_1818 - hypothetical protein 1813 44.61 0 2221645..2222052 + 135 157961643 - Spea_1819 - curli production assembly/transport component CsgF precursor 1814 46.64 0 2222055..2222903 + 282 157961644 - Spea_1820 - curli production assembly/transport component CsgG 1815 42.77 0 2223106..2223444 + 112 157961645 - Spea_1821 - hypothetical protein 1816 40.68 -1 2223553..2223906 + 117 157961646 - Spea_1822 - hypothetical protein 1817 44.69 0 2223974..2224387 - 137 157961647 - Spea_1823 - TetR family transcriptional regulator 1818 43.98 0 2224584..2224940 + 118 157961648 - Spea_1824 - histidine triad (HIT) protein 1819 46.15 0 2224937..2225443 + 168 157961649 - Spea_1825 - thioesterase superfamily protein 1820 43.79 0 2225430..2225936 + 168 157961650 - Spea_1826 - thioesterase superfamily protein 1821 46.41 0 2225993..2226382 + 129 157961651 - Spea_1827 - hypothetical protein 1822 45.68 0 2226691..2228829 + 712 157961652 - Spea_1828 - TonB-dependent receptor 1823 39.08 -1 2228890..2229150 + 86 157961653 - Spea_1829 - hypothetical protein 1824 44.95 0 2229271..2229933 + 220 157961654 - Spea_1830 - nicotinamide mononucleotide transporter PnuC 1825 46.42 0 2229934..2230995 + 353 157961655 - Spea_1831 - aminoglycoside phosphotransferase 1826 44.44 0 2231316..2231909 + 197 157961656 - Spea_1832 - DoxX family protein 1827 47.72 0 2232132..2232680 + 182 157961657 - Spea_1833 - nitroreductase 1828 46.00 0 2232804..2233403 + 199 157961658 - Spea_1834 - GCN5-related N-acetyltransferase 1829 48.40 0 2233617..2234021 + 134 157961659 - Spea_1835 - hypothetical protein 1830 43.33 0 2234294..2234683 + 129 157961660 - Spea_1836 - hypothetical protein 1831 46.72 0 2235133..2235819 + 228 157961661 - Spea_1837 - ABC transporter related 1832 44.96 0 2235809..2236900 + 363 157961662 - Spea_1838 - multidrug resistance efflux pump-like protein 1833 47.04 0 2236897..2238063 + 388 157961663 - Spea_1839 - membrane-fusion protein 1834 46.05 0 2238060..2239349 + 429 157961664 - Spea_1840 - membrane-fusion protein 1835 48.17 0 2239346..2240659 + 437 157961665 - Spea_1841 - hypothetical protein 1836 45.30 0 2240933..2241559 + 208 157961666 - Spea_1842 - Ion transport 2 domain-containing protein 1837 47.14 0 2241570..2242721 + 383 157961667 - Spea_1843 - hypothetical protein 1838 46.15 0 2243350..2244402 + 350 157961668 - Spea_1844 - hypothetical protein 1839 42.86 0 2244402..2245556 + 384 157961669 - Spea_1845 - hypothetical protein 1840 43.91 0 2245546..2246046 + 166 157961670 - Spea_1846 - hypothetical protein 1841 42.68 0 2246629..2246949 - 106 157961671 - Spea_1847 - hypothetical protein 1842 38.31 -2 2246974..2247174 - 66 157961672 - Spea_1848 - hypothetical protein 1843 45.22 0 2247286..2250600 - 1104 157961673 - Spea_1849 - hypothetical protein 1844 43.44 0 2250740..2251738 - 332 157961674 - Spea_1850 - hypothetical protein 1845 44.92 0 2252105..2252950 - 281 157961675 - Spea_1851 - aldose 1-epimerase 1846 48.35 0 2253169..2254959 + 596 157961676 - Spea_1852 - acyl-CoA dehydrogenase domain-containing protein 1847 45.17 0 2255283..2255975 + 230 157961677 - Spea_1853 - nucleotidase 1848 47.22 0 2256000..2256611 - 203 157961678 - Spea_1854 - hypothetical protein 1849 42.08 0 2256743..2257108 + 121 157961679 - Spea_1855 - hypothetical protein 1850 41.75 -1 2257188..2257484 + 98 157961680 - Spea_1856 - putative transcriptional regulator, Fis family protein 1851 46.53 0 2257913..2260102 - 729 157961681 - Spea_1857 - peptidyl-dipeptidase Dcp 1852 49.58 +1 2260562..2262001 - 479 157961682 - Spea_1858 - hypothetical protein 1853 52.54 +2 2263272..2263901 + 209 157961683 - Spea_1859 - XRE family transcriptional regulator 1854 47.56 0 2264244..2265818 + 524 157961684 - Spea_1860 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1855 46.71 0 2266076..2267017 - 313 157961685 - Spea_1861 - transporter DMT superfamily protein 1856 45.88 0 2268123..2270522 + 799 157961686 - Spea_1862 - TonB-dependent receptor plug 1857 48.92 +1 2270984..2271952 - 322 157961687 - Spea_1863 - ribonucleoside hydrolase 1 1858 49.56 +1 2272206..2274005 - 599 157961688 - Spea_1864 - gamma-glutamyltransferase 1859 42.18 0 2274200..2275420 + 406 157961689 - Spea_1865 - hypothetical protein 1860 44.95 0 2275491..2275817 - 108 157961690 - Spea_1866 - hypothetical protein 1861 43.15 0 2275913..2276248 - 111 157961691 - Spea_1867 - hypothetical protein 1862 39.15 -1 2276507..2276884 - 125 157961692 - Spea_1868 - hypothetical protein 1863 47.18 0 2276940..2277560 - 206 157961693 - Spea_1869 - lysine exporter protein LysE/YggA 1864 35.78 -2 2278702..2279517 + 271 157961694 - Spea_1870 - hypothetical protein 1865 35.87 -2 2279689..2281341 + 550 157961695 - Spea_1871 - hypothetical protein 1866 33.96 -2 2281416..2283173 + 585 157961696 - Spea_1872 - hypothetical protein 1867 43.32 0 2283981..2285021 - 346 157961697 - Spea_1873 - 4-hydroxyphenylpyruvate dioxygenase 1868 46.60 0 2285111..2286271 - 386 157961698 - Spea_1874 - homogentisate 12-dioxygenase 1869 46.11 0 2286427..2287326 + 299 157961699 - Spea_1875 - LysR family transcriptional regulator 1870 41.67 -1 2287728..2288087 + 119 157961700 - Spea_1876 - hypothetical protein 1871 46.63 0 2288240..2289232 - 330 157961701 - Spea_1877 - cytochrome-c peroxidase 1872 42.86 0 2289486..2289716 - 76 157961702 - Spea_1878 - integral membrane protein TerC 1873 44.32 0 2289976..2290767 + 263 157961703 - Spea_1879 - ABC transporter 1874 43.57 0 2290918..2291757 + 279 157961704 - Spea_1880 - alpha/beta hydrolase fold 1875 44.85 0 2291767..2292174 - 135 157961705 - Spea_1881 - hypothetical protein 1876 43.36 0 2292552..2293469 + 305 157961706 - Spea_1882 - hypothetical protein 1877 47.22 0 2293491..2293634 + 47 157961707 - Spea_1883 - hypothetical protein 1878 35.06 -2 2294204..2294377 - 57 157961708 - Spea_1884 - hypothetical protein 1879 43.43 0 2294882..2295772 + 296 157961709 - Spea_1885 - MscS mechanosensitive ion channel 1880 38.42 -2 2296140..2296709 - 189 157961710 - Spea_1886 - hypothetical protein 1881 35.02 -2 2296792..2297622 - 276 157961711 - Spea_1887 - phage exclusion protein Lit 1882 38.19 -2 2297800..2298582 - 260 157961712 - Spea_1888 - hypothetical protein 1883 41.08 -1 2298749..2299174 - 141 157961713 - Spea_1890 - hypothetical protein 1884 40.10 -1 2299645..2299851 - 68 157961714 - Spea_1891 - XRE family transcriptional regulator 1885 38.70 -1 2299980..2300519 + 179 157961715 - Spea_1892 - hypothetical protein 1886 38.20 -2 2300525..2301943 + 472 157961716 - Spea_1893 - type III restriction protein res subunit 1887 38.01 -2 2302098..2302910 - 270 157961717 - Spea_1894 - hypothetical protein 1888 40.50 -1 2303250..2303528 - 92 157961718 - Spea_1895 - hypothetical protein 1889 39.58 -1 2304868..2305251 - 127 157961719 - Spea_1896 - hypothetical protein 1890 40.97 -1 2305253..2307295 - 680 157961720 - Spea_1897 - integrase family protein 1891 39.39 -1 2307295..2309985 - 896 157961721 - Spea_1898 - hypothetical protein 1892 40.58 -1 2309986..2311365 - 459 157961722 - Spea_1899 - integrase family protein 1893 44.12 0 2311491..2312213 + 240 157961723 - Spea_1900 - MscS mechanosensitive ion channel 1894 43.81 0 2312303..2313247 + 314 157961724 - Spea_1901 - response regulator receiver modulated CheW protein 1895 41.40 -1 2313309..2313953 - 214 157961725 - Spea_1902 - hypothetical protein 1896 45.00 0 2314040..2314399 - 119 157961726 - Spea_1903 - hypothetical protein 1897 47.94 0 2314764..2315954 + 396 157961727 - Spea_1904 - lytic murein transglycosylase 1898 46.38 0 2316083..2316565 + 160 157961728 - Spea_1905 - peptidylprolyl isomerase FKBP-type 1899 41.10 -1 2316639..2316857 + 72 157961729 - Spea_1906 - hypothetical protein 1900 46.84 0 2316970..2317650 + 226 157961730 - Spea_1907 - carboxylesterase 1901 42.99 0 2318021..2319739 + 572 157961731 - Spea_1908 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 1902 43.31 0 2320035..2320475 + 146 157961732 - Spea_1909 - heat shock protein Hsp20 1903 45.25 0 2320555..2321049 - 164 157961733 - Spea_1910 - acetolactate synthase, small subunit 1904 46.40 0 2321049..2322770 - 573 157961734 - Spea_1911 - acetolactate synthase, large subunit, biosynthetic type 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0