IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1798	 45.20	0	2203089..2203754	+	221	157961628	-	Spea_1804	-	dethiobiotin synthase
1799	 45.60	0	2204080..2204943	+	287	157961629	-	Spea_1805	-	heat shock protein HtpX
1800	 48.27	0	2205206..2205580	+	124	157961630	-	Spea_1806	-	cytochrome c3
1801	 44.99	0	2205895..2208810	+	971	157961631	-	Spea_1807	-	molybdopterin oxidoreductase
1802	 46.87	0	2208785..2209759	+	324	157961632	-	Spea_1808	-	uroporphyrin-III C-methyltransferase
1803	 44.66	0	2209848..2211074	+	408	157961633	-	Spea_1809	-	glycosyl transferase family protein
1804	 43.82	0	2211062..2211652	+	196	157961634	-	Spea_1810	-	response regulator receiver/ANTAR domain-containing protein
1805	 45.43	0	2212030..2214699	+	889	157961635	-	Spea_1811	-	nitrite reductase (NAD(P)H), large subunit
1806	 45.41	0	2214696..2215076	+	126	157961636	-	Spea_1812	-	nitrite reductase (NAD(P)H), small subunit
1807	 45.94	0	2215078..2216544	+	488	157961637	-	Spea_1813	-	nitrite transporter
1808	 43.44	0	2216549..2218339	+	596