IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1781	 44.92	0	2181712..2182419	+	235	157961611	-	Spea_1787	-	succinate dehydrogenase iron-sulfur subunit
1782	 47.61	0	2182627..2185449	+	940	157961612	-	Spea_1788	-	alpha-ketoglutarate decarboxylase
1783	 46.03	0	2185482..2186678	+	398	157961613	-	Spea_1789	-	2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
1784	 45.84	0	2186757..2187923	+	388	157961614	-	Spea_1790	-	succinyl-CoA synthetase subunit beta
1785	 45.82	0	2187923..2188795	+	290	157961615	-	Spea_1791	-	succinyl-CoA synthetase, alpha subunit
1786	 41.42	-1	2189051..2189359	+	102	157961616	-	Spea_1792	-	hypothetical protein
1787	 42.02	0	2189752..2190672	+	306	157961617	-	Spea_1793	-	auxin efflux carrier
1788	 44.40	0	2190673..2192325	-	550	157961618	-	Spea_1794	-	ferredoxin-dependent glutamate synthase
1789	 41.72	-1	2192478..2192978	+	166	157961619	-	Spea_1795	-	GCN5-related N-acetyltransferase
1790	 42.13	0	2193048..2193479	-	143	157961620	-	Spea_1796	-	ferric uptake regulator
1791	 46.28	0	2193748..2194473	+	241