IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1773	 47.92	0	2168876..2171953	-	1025	157961603	-	Spea_1779	-	acriflavin resistance protein
1774	 47.54	0	2171950..2175258	-	1102	157961604	-	Spea_1780	-	acriflavin resistance protein
1775	 44.99	0	2175365..2176471	-	368	157961605	-	Spea_1781	-	RND family efflux transporter MFP subunit
1776	 46.88	0	2176888..2176983	-	31	157961606	-	Spea_1782	-	citrate synthase I
1777	 44.96	0	2177495..2178784	-	429	157961607	-	Spea_1783	-	type II citrate synthase
1778	 45.87	0	2179217..2179591	+	124	157961608	-	Spea_1784	-	succinate dehydrogenase cytochrome b556 subunit
1779	 44.35	0	2179579..2179932	+	117	157961609	-	Spea_1785	-	succinate dehydrogenase hydrophobic membrane anchor
1780	 48.22	0	2179933..2181699	+	588	157961610	-	Spea_1786	-	succinate dehydrogenase flavoprotein subunit
1781	 44.92	0	2181712..2182419	+	235	157961611	-	Spea_1787	-	succinate dehydrogenase iron-sulfur subunit
1782	 47.61	0	2182627..2185449	+	940	157961612	-	Spea_1788	-	alpha-ketoglutarate decarboxylase
1783	 46.03	0	2185482..2186678	+	398