version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1767 46.85 0 2155634..2158717 + 1027 157961597 - Spea_1773 - peptidase M11 gametolysin 1768 46.83 0 2158857..2161271 - 804 157961598 - Spea_1774 - hypothetical protein 1769 44.57 0 2162047..2162838 - 263 157961599 - Spea_1775 - DSBA oxidoreductase 1770 44.86 0 2162881..2164251 - 456 157961600 - Spea_1776 - sigma-54 dependent trancsriptional regulator 1771 45.81 0 2164510..2166825 - 771 157961601 - Spea_1777 - hypothetical protein 1772 39.24 -1 2167162..2168601 - 479 157961602 - Spea_1778 - hypothetical protein 1773 47.92 0 2168876..2171953 - 1025 157961603 - Spea_1779 - acriflavin resistance protein 1774 47.54 0 2171950..2175258 - 1102 157961604 - Spea_1780 - acriflavin resistance protein 1775 44.99 0 2175365..2176471 - 368 157961605 - Spea_1781 - RND family efflux transporter MFP subunit 1776 46.88 0 2176888..2176983 - 31 157961606 - Spea_1782 - citrate synthase I 1777 44.96 0 2177495..2178784 - 429 157961607 - Spea_1783 - type II citrate synthase 1778 45.87 0 2179217..2179591 + 124 157961608 - Spea_1784 - succinate dehydrogenase cytochrome b556 subunit 1779 44.35 0 2179579..2179932 + 117 157961609 - Spea_1785 - succinate dehydrogenase hydrophobic membrane anchor 1780 48.22 0 2179933..2181699 + 588 157961610 - Spea_1786 - succinate dehydrogenase flavoprotein subunit 1781 44.92 0 2181712..2182419 + 235 157961611 - Spea_1787 - succinate dehydrogenase iron-sulfur subunit 1782 47.61 0 2182627..2185449 + 940 157961612 - Spea_1788 - alpha-ketoglutarate decarboxylase 1783 46.03 0 2185482..2186678 + 398 157961613 - Spea_1789 - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1784 45.84 0 2186757..2187923 + 388 157961614 - Spea_1790 - succinyl-CoA synthetase subunit beta 1785 45.82 0 2187923..2188795 + 290 157961615 - Spea_1791 - succinyl-CoA synthetase, alpha subunit 1786 41.42 -1 2189051..2189359 + 102 157961616 - Spea_1792 - hypothetical protein 1787 42.02 0 2189752..2190672 + 306 157961617 - Spea_1793 - auxin efflux carrier 1788 44.40 0 2190673..2192325 - 550 157961618 - Spea_1794 - ferredoxin-dependent glutamate synthase 1789 41.72 -1 2192478..2192978 + 166 157961619 - Spea_1795 - GCN5-related N-acetyltransferase 1790 42.13 0 2193048..2193479 - 143 157961620 - Spea_1796 - ferric uptake regulator 1791 46.28 0 2193748..2194473 + 241 157961621 - Spea_1797 - NAD-dependent deacetylase 1792 40.43 -1 2194546..2195010 + 154 157961622 - Spea_1798 - hypothetical protein 1793 44.41 0 2195597..2197681 - 694 157961623 - Spea_1799 - elongation factor G 1794 46.09 0 2198094..2199434 - 446 157961624 - Spea_1800 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1795 45.58 0 2199684..2200736 + 350 157961625 - Spea_1801 - biotin synthase 1796 46.73 0 2201013..2202206 + 397 157961626 - Spea_1802 - aminotransferase class I and II 1797 47.21 0 2202291..2203061 + 256 157961627 - Spea_1803 - methyltransferase type 11 1798 45.20 0 2203089..2203754 + 221 157961628 - Spea_1804 - dethiobiotin synthase 1799 45.60 0 2204080..2204943 + 287 157961629 - Spea_1805 - heat shock protein HtpX 1800 48.27 0 2205206..2205580 + 124 157961630 - Spea_1806 - cytochrome c3 1801 44.99 0 2205895..2208810 + 971 157961631 - Spea_1807 - molybdopterin oxidoreductase 1802 46.87 0 2208785..2209759 + 324 157961632 - Spea_1808 - uroporphyrin-III C-methyltransferase 1803 44.66 0 2209848..2211074 + 408 157961633 - Spea_1809 - glycosyl transferase family protein 1804 43.82 0 2211062..2211652 + 196 157961634 - Spea_1810 - response regulator receiver/ANTAR domain-containing protein 1805 45.43 0 2212030..2214699 + 889 157961635 - Spea_1811 - nitrite reductase (NAD(P)H), large subunit 1806 45.41 0 2214696..2215076 + 126 157961636 - Spea_1812 - nitrite reductase (NAD(P)H), small subunit 1807 45.94 0 2215078..2216544 + 488 157961637 - Spea_1813 - nitrite transporter 1808 43.44 0 2216549..2218339 + 596 157961638 - Spea_1814 - serine/threonine protein kinase 1809 38.67 -1 2218439..2219581 + 380 157961639 - Spea_1815 - TPR repeat-containing protein 1810 42.75 0 2219874..2220425 + 183 157961640 - Spea_1816 - curlin-associated protein 1811 42.45 0 2220539..2221174 + 211 157961641 - Spea_1817 - LuxR family transcriptional regulator 1812 43.94 0 2221171..2221632 + 153 157961642 - Spea_1818 - hypothetical protein 1813 44.61 0 2221645..2222052 + 135 157961643 - Spea_1819 - curli production assembly/transport component CsgF precursor 1814 46.64 0 2222055..2222903 + 282 157961644 - Spea_1820 - curli production assembly/transport component CsgG 1815 42.77 0 2223106..2223444 + 112 157961645 - Spea_1821 - hypothetical protein 1816 40.68 -1 2223553..2223906 + 117 157961646 - Spea_1822 - hypothetical protein 1817 44.69 0 2223974..2224387 - 137 157961647 - Spea_1823 - TetR family transcriptional regulator 1818 43.98 0 2224584..2224940 + 118 157961648 - Spea_1824 - histidine triad (HIT) protein 1819 46.15 0 2224937..2225443 + 168 157961649 - Spea_1825 - thioesterase superfamily protein 1820 43.79 0 2225430..2225936 + 168 157961650 - Spea_1826 - thioesterase superfamily protein 1821 46.41 0 2225993..2226382 + 129 157961651 - Spea_1827 - hypothetical protein 1822 45.68 0 2226691..2228829 + 712 157961652 - Spea_1828 - TonB-dependent receptor 1823 39.08 -1 2228890..2229150 + 86 157961653 - Spea_1829 - hypothetical protein 1824 44.95 0 2229271..2229933 + 220 157961654 - Spea_1830 - nicotinamide mononucleotide transporter PnuC 1825 46.42 0 2229934..2230995 + 353 157961655 - Spea_1831 - aminoglycoside phosphotransferase 1826 44.44 0 2231316..2231909 + 197 157961656 - Spea_1832 - DoxX family protein 1827 47.72 0 2232132..2232680 + 182 157961657 - Spea_1833 - nitroreductase 1828 46.00 0 2232804..2233403 + 199 157961658 - Spea_1834 - GCN5-related N-acetyltransferase 1829 48.40 0 2233617..2234021 + 134 157961659 - Spea_1835 - hypothetical protein 1830 43.33 0 2234294..2234683 + 129 157961660 - Spea_1836 - hypothetical protein 1831 46.72 0 2235133..2235819 + 228 157961661 - Spea_1837 - ABC transporter related 1832 44.96 0 2235809..2236900 + 363 157961662 - Spea_1838 - multidrug resistance efflux pump-like protein 1833 47.04 0 2236897..2238063 + 388 157961663 - Spea_1839 - membrane-fusion protein 1834 46.05 0 2238060..2239349 + 429 157961664 - Spea_1840 - membrane-fusion protein 1835 48.17 0 2239346..2240659 + 437 157961665 - Spea_1841 - hypothetical protein 1836 45.30 0 2240933..2241559 + 208 157961666 - Spea_1842 - Ion transport 2 domain-containing protein 1837 47.14 0 2241570..2242721 + 383 157961667 - Spea_1843 - hypothetical protein 1838 46.15 0 2243350..2244402 + 350 157961668 - Spea_1844 - hypothetical protein 1839 42.86 0 2244402..2245556 + 384 157961669 - Spea_1845 - hypothetical protein 1840 43.91 0 2245546..2246046 + 166 157961670 - Spea_1846 - hypothetical protein 1841 42.68 0 2246629..2246949 - 106 157961671 - Spea_1847 - hypothetical protein 1842 38.31 -2 2246974..2247174 - 66 157961672 - Spea_1848 - hypothetical protein 1843 45.22 0 2247286..2250600 - 1104 157961673 - Spea_1849 - hypothetical protein 1844 43.44 0 2250740..2251738 - 332 157961674 - Spea_1850 - hypothetical protein 1845 44.92 0 2252105..2252950 - 281 157961675 - Spea_1851 - aldose 1-epimerase 1846 48.35 0 2253169..2254959 + 596 157961676 - Spea_1852 - acyl-CoA dehydrogenase domain-containing protein 1847 45.17 0 2255283..2255975 + 230 157961677 - Spea_1853 - nucleotidase 1848 47.22 0 2256000..2256611 - 203 157961678 - Spea_1854 - hypothetical protein 1849 42.08 0 2256743..2257108 + 121 157961679 - Spea_1855 - hypothetical protein 1850 41.75 -1 2257188..2257484 + 98 157961680 - Spea_1856 - putative transcriptional regulator, Fis family protein 1851 46.53 0 2257913..2260102 - 729 157961681 - Spea_1857 - peptidyl-dipeptidase Dcp 1852 49.58 +1 2260562..2262001 - 479 157961682 - Spea_1858 - hypothetical protein 1853 52.54 +2 2263272..2263901 + 209 157961683 - Spea_1859 - XRE family transcriptional regulator 1854 47.56 0 2264244..2265818 + 524 157961684 - Spea_1860 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1855 46.71 0 2266076..2267017 - 313 157961685 - Spea_1861 - transporter DMT superfamily protein 1856 45.88 0 2268123..2270522 + 799 157961686 - Spea_1862 - TonB-dependent receptor plug 1857 48.92 +1 2270984..2271952 - 322 157961687 - Spea_1863 - ribonucleoside hydrolase 1 1858 49.56 +1 2272206..2274005 - 599 157961688 - Spea_1864 - gamma-glutamyltransferase 1859 42.18 0 2274200..2275420 + 406 157961689 - Spea_1865 - hypothetical protein 1860 44.95 0 2275491..2275817 - 108 157961690 - Spea_1866 - hypothetical protein 1861 43.15 0 2275913..2276248 - 111 157961691 - Spea_1867 - hypothetical protein 1862 39.15 -1 2276507..2276884 - 125 157961692 - Spea_1868 - hypothetical protein 1863 47.18 0 2276940..2277560 - 206 157961693 - Spea_1869 - lysine exporter protein LysE/YggA 1864 35.78 -2 2278702..2279517 + 271 157961694 - Spea_1870 - hypothetical protein 1865 35.87 -2 2279689..2281341 + 550 157961695 - Spea_1871 - hypothetical protein 1866 33.96 -2 2281416..2283173 + 585 157961696 - Spea_1872 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0