IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1764	 46.44	0	2152187..2154010	+	607	157961594	-	Spea_1770	-	lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
1765	 48.74	+1	2154011..2155003	+	330	157961595	-	Spea_1771	-	tetraacyldisaccharide 4'-kinase
1766	 40.80	-1	2155015..2155188	+	57	157961596	-	Spea_1772	-	hypothetical protein
1767	 46.85	0	2155634..2158717	+	1027	157961597	-	Spea_1773	-	peptidase M11 gametolysin
1768	 46.83	0	2158857..2161271	-	804	157961598	-	Spea_1774	-	hypothetical protein
1769	 44.57	0	2162047..2162838	-	263	157961599	-	Spea_1775	-	DSBA oxidoreductase
1770	 44.86	0	2162881..2164251	-	456	157961600	-	Spea_1776	-	sigma-54 dependent trancsriptional regulator
1771	 45.81	0	2164510..2166825	-	771	157961601	-	Spea_1777	-	hypothetical protein
1772	 39.24	-1	2167162..2168601	-	479	157961602	-	Spea_1778	-	hypothetical protein
1773	 47.92	0	2168876..2171953	-	1025	157961603	-	Spea_1779	-	acriflavin resistance protein
1774	 47.54	0	2171950..2175258	-	1102	157961604