IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
108	 42.37	0	121550..122191	-	213	157959938	-	Spea_0108	-	TetR family transcriptional regulator
109	 48.66	+1	122368..123633	+	421	157959939	-	Spea_0109	-	3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
110	 47.40	0	123700..124431	-	243	157959940	-	Spea_0110	-	3-deoxy-D-manno-octulosonic-acid kinase
111	 47.50	0	124517..125596	+	359	157959941	-	Spea_0111	-	glycosyl transferase family protein
112	 45.52	0	125661..126743	+	360	157959942	-	Spea_0112	-	hypothetical protein
113	 42.73	0	126743..127828	+	361	157959943	-	Spea_0113	-	glycosyl transferase group 1
114	 43.28	0	127858..128913	+	351	157959944	-	Spea_0114	-	CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
115	 39.74	-1	128921..129997	-	358	157959945	-	Spea_0115	-	glycosyl transferase group 1
116	 40.86	-1	130187..130930	+	247	157959946	-	Spea_0116	-	glycosyl transferase family protein
117	 43.21	0	131013..131174	+	53	157959947	-	Spea_0117	-	hypothetical protein
118	 45.10	0	131327..132550	+	407