IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
106	 48.25	0	118993..120018	-	341	157959936	-	Spea_0106	-	L-threonine 3-dehydrogenase
107	 47.70	0	120102..121298	-	398	157959937	-	Spea_0107	-	2-amino-3-ketobutyrate coenzyme A ligase
108	 42.37	0	121550..122191	-	213	157959938	-	Spea_0108	-	TetR family transcriptional regulator
109	 48.66	+1	122368..123633	+	421	157959939	-	Spea_0109	-	3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
110	 47.40	0	123700..124431	-	243	157959940	-	Spea_0110	-	3-deoxy-D-manno-octulosonic-acid kinase
111	 47.50	0	124517..125596	+	359	157959941	-	Spea_0111	-	glycosyl transferase family protein
112	 45.52	0	125661..126743	+	360	157959942	-	Spea_0112	-	hypothetical protein
113	 42.73	0	126743..127828	+	361	157959943	-	Spea_0113	-	glycosyl transferase group 1
114	 43.28	0	127858..128913	+	351	157959944	-	Spea_0114	-	CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
115	 39.74	-1	128921..129997	-	358	157959945	-	Spea_0115	-	glycosyl transferase group 1
116	 40.86	-1	130187..130930	+	247