IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
101	 43.51	0	112447..113124	+	225	157959931	-	Spea_0101	-	GTPase EngB
102	 47.04	0	113799..116555	-	918	157959932	-	Spea_0102	-	DNA polymerase I
103	 46.64	0	116943..117596	+	217	157959933	-	Spea_0103	-	isoprenoid biosynthesis protein with amidotransferase-like domain
104	 47.02	0	117717..118556	-	279	157959934	-	Spea_0104	-	rhomboid family protein
105	 43.04	0	118577..118885	-	102	157959935	-	Spea_0105	-	rhodanese domain-containing protein
106	 48.25	0	118993..120018	-	341	157959936	-	Spea_0106	-	L-threonine 3-dehydrogenase
107	 47.70	0	120102..121298	-	398	157959937	-	Spea_0107	-	2-amino-3-ketobutyrate coenzyme A ligase
108	 42.37	0	121550..122191	-	213	157959938	-	Spea_0108	-	TetR family transcriptional regulator
109	 48.66	+1	122368..123633	+	421	157959939	-	Spea_0109	-	3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
110	 47.40	0	123700..124431	-	243	157959940	-	Spea_0110	-	3-deoxy-D-manno-octulosonic-acid kinase
111	 47.50	0	124517..125596	+	359