IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
93	 49.86	+1	101823..103904	+	693	157959923	-	Spea_0093	-	flagellar biosynthesis protein FlhA
94	 49.54	+1	103963..104937	-	324	157959924	-	Spea_0094	-	alpha/beta hydrolase fold
95	 50.22	+1	105266..107065	-	599	157959925	-	Spea_0095	-	hypothetical protein
96	 44.59	0	107416..108756	-	446	157959926	-	Spea_0096	-	coproporphyrinogen III oxidase
97	 44.44	0	109044..109511	-	155	157959927	-	Spea_0097	-	hypothetical protein
98	 42.27	0	109605..110141	-	178	157959928	-	Spea_0098	-	hypothetical protein
99	 44.25	0	110195..110863	-	222	157959929	-	Spea_0099	-	hypothetical protein
100	 44.28	0	111657..112277	-	206	157959930	-	Spea_0100	-	cytochrome c class I
101	 43.51	0	112447..113124	+	225	157959931	-	Spea_0101	-	GTPase EngB
102	 47.04	0	113799..116555	-	918	157959932	-	Spea_0102	-	DNA polymerase I
103	 46.64	0	116943..117596	+	217	157959933	-	Spea_0103	-	isoprenoid biosynthesis protein with amidotransferase-like domain
104	 47.02	0	117717..118556	-	279