IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1349	 46.67	0	1646348..1647532	+	394	157961179	-	Spea_1351	-	flagellin domain-containing protein
1350	 46.45	0	1648279..1649460	+	393	157961180	-	Spea_1352	-	flagellin domain-containing protein
1351	 42.19	0	1649673..1650146	+	157	157961181	-	Spea_1353	-	flagellar protein FlaG protein
1352	 44.79	0	1650241..1651602	+	453	157961182	-	Spea_1354	-	flagellar hook-associated 2 domain-containing protein
1353	 42.06	0	1651749..1652126	+	125	157961183	-	Spea_1355	-	hypothetical protein
1354	 42.29	0	1652133..1652534	+	133	157961184	-	Spea_1356	-	flagellar protein FliS
1355	 44.42	0	1652848..1654281	+	477	157961185	-	Spea_1357	-	sigma-54 dependent trancsriptional regulator
1356	 46.42	0	1654839..1655954	+	371	157961186	-	Spea_1358	-	PAS/PAC sensor signal transduction histidine kinase
1357	 48.26	0	1655947..1657299	+	450	157961187	-	Spea_1359	-	two component, sigma54 specific, Fis family transcriptional regulator
1358	 43.24	0	1657813..1658145	+	110	157961188	-	Spea_1360	-	flagellar hook-basal body complex subunit FliE
1359	 48.03	0	1658188..1659888	+	566