IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1346	 46.34	0	1641697..1642788	+	363	157961176	-	Spea_1348	-	peptidoglycan hydrolase
1347	 47.79	0	1642832..1644754	+	640	157961177	-	Spea_1349	-	flagellar hook-associated protein FlgK
1348	 45.72	0	1644839..1646041	+	400	157961178	-	Spea_1350	-	flagellar hook-associated protein FlgL
1349	 46.67	0	1646348..1647532	+	394	157961179	-	Spea_1351	-	flagellin domain-containing protein
1350	 46.45	0	1648279..1649460	+	393	157961180	-	Spea_1352	-	flagellin domain-containing protein
1351	 42.19	0	1649673..1650146	+	157	157961181	-	Spea_1353	-	flagellar protein FlaG protein
1352	 44.79	0	1650241..1651602	+	453	157961182	-	Spea_1354	-	flagellar hook-associated 2 domain-containing protein
1353	 42.06	0	1651749..1652126	+	125	157961183	-	Spea_1355	-	hypothetical protein
1354	 42.29	0	1652133..1652534	+	133	157961184	-	Spea_1356	-	flagellar protein FliS
1355	 44.42	0	1652848..1654281	+	477	157961185	-	Spea_1357	-	sigma-54 dependent trancsriptional regulator
1356	 46.42	0	1654839..1655954	+	371