version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1340 47.11 0 1635379..1636191 + 270 157961170 - Spea_1342 - flagellar basal body rod modification protein 1341 47.80 0 1636277..1637638 + 453 157961171 - Spea_1343 - flagellar hook protein FlgE 1342 49.33 +1 1638295..1639038 + 247 157961172 - Spea_1344 - flagellar basal body rod protein FlgF 1343 45.25 0 1639049..1639837 + 262 157961173 - Spea_1345 - flagellar basal body rod protein FlgG 1344 46.94 0 1639881..1640534 + 217 157961174 - Spea_1346 - flagellar basal body L-ring protein 1345 48.58 +1 1640574..1641668 + 364 157961175 - Spea_1347 - flagellar basal body P-ring protein 1346 46.34 0 1641697..1642788 + 363 157961176 - Spea_1348 - peptidoglycan hydrolase 1347 47.79 0 1642832..1644754 + 640 157961177 - Spea_1349 - flagellar hook-associated protein FlgK 1348 45.72 0 1644839..1646041 + 400 157961178 - Spea_1350 - flagellar hook-associated protein FlgL 1349 46.67 0 1646348..1647532 + 394 157961179 - Spea_1351 - flagellin domain-containing protein 1350 46.45 0 1648279..1649460 + 393 157961180 - Spea_1352 - flagellin domain-containing protein 1351 42.19 0 1649673..1650146 + 157 157961181 - Spea_1353 - flagellar protein FlaG protein 1352 44.79 0 1650241..1651602 + 453 157961182 - Spea_1354 - flagellar hook-associated 2 domain-containing protein 1353 42.06 0 1651749..1652126 + 125 157961183 - Spea_1355 - hypothetical protein 1354 42.29 0 1652133..1652534 + 133 157961184 - Spea_1356 - flagellar protein FliS 1355 44.42 0 1652848..1654281 + 477 157961185 - Spea_1357 - sigma-54 dependent trancsriptional regulator 1356 46.42 0 1654839..1655954 + 371 157961186 - Spea_1358 - PAS/PAC sensor signal transduction histidine kinase 1357 48.26 0 1655947..1657299 + 450 157961187 - Spea_1359 - two component, sigma54 specific, Fis family transcriptional regulator 1358 43.24 0 1657813..1658145 + 110 157961188 - Spea_1360 - flagellar hook-basal body complex subunit FliE 1359 48.03 0 1658188..1659888 + 566 157961189 - Spea_1361 - flagellar MS-ring protein 1360 46.19 0 1659878..1660927 + 349 157961190 - Spea_1362 - flagellar motor switch protein G 1361 49.00 +1 1660927..1661877 + 316 157961191 - Spea_1363 - flagellar assembly protein FliH 1362 52.50 +2 1661849..1663189 + 446 157961192 - Spea_1364 - flagellum-specific ATP synthase 1363 49.44 +1 1663244..1663690 + 148 157961193 - Spea_1365 - flagellar export protein FliJ 1364 47.28 0 1663908..1665434 + 508 157961194 - Spea_1366 - flagellar hook-length control protein 1365 46.63 0 1665511..1666029 + 172 157961195 - Spea_1367 - flagellar basal body-associated protein FliL 1366 46.55 0 1666098..1667126 + 342 157961196 - Spea_1368 - flagellar motor switch protein FliM 1367 45.93 0 1667139..1667519 + 126 157961197 - Spea_1369 - flagellar motor switch protein 1368 47.47 0 1667547..1667921 + 124 157961198 - Spea_1370 - flagellar biosynthesis protein FliO 1369 43.47 0 1667932..1668681 + 249 157961199 - Spea_1371 - flagellar biosynthesis protein FliP 1370 44.07 0 1668689..1668958 + 89 157961200 - Spea_1372 - flagellar biosynthetic protein FliQ 1371 48.19 0 1668997..1669797 + 266 157961201 - Spea_1373 - flagellar biosynthesis protein FliR 1372 48.32 0 1669939..1671072 + 377 157961202 - Spea_1374 - flagellar biosynthesis protein FlhB 1373 49.81 +1 1671339..1673438 + 699 157961203 - Spea_1375 - flagellar biosynthesis protein FlhA 1374 44.66 0 1673450..1674862 + 470 157961204 - Spea_1376 - flagellar biosynthesis regulator FlhF 1375 46.37 0 1674867..1675748 + 293 157961205 - Spea_1377 - cobyrinic acid ac-diamide synthase 1376 46.67 0 1675741..1676460 + 239 157961206 - Spea_1378 - flagellar biosynthesis sigma factor 1377 44.85 0 1676497..1676904 + 135 157961207 - Spea_1379 - response regulator receiver protein 1378 41.87 -1 1676918..1677655 + 245 157961208 - Spea_1380 - chemotaxis phosphatase, CheZ 1379 46.36 0 1677668..1679893 + 741 157961209 - Spea_1381 - CheA signal transduction histidine kinase 1380 47.88 0 1679983..1681164 + 393 157961210 - Spea_1382 - chemotaxis-specific methylesterase 1381 43.67 0 1681157..1681843 + 228 157961211 - Spea_1383 - hypothetical protein 1382 44.32 0 1681984..1682775 + 263 157961212 - Spea_1384 - cobyrinic acid ac-diamide synthase 1383 45.32 0 1682759..1683676 + 305 157961213 - Spea_1385 - CheW protein 1384 42.89 0 1684185..1684676 + 163 157961214 - Spea_1386 - CheW protein 1385 45.19 0 1685059..1685463 + 134 157961215 - Spea_1387 - hypothetical protein 1386 47.90 0 1685881..1686189 - 102 157961216 - Spea_1388 - FlhB domain-containing protein 1387 41.18 -1 1686216..1687718 - 500 157961217 - Spea_1389 - hypothetical protein 1388 44.40 0 1688215..1688982 + 255 157961218 - Spea_1390 - VacJ family lipoprotein 1389 42.28 0 1689078..1690184 + 368 157961219 - Spea_1391 - response regulator receiver protein 1390 44.49 0 1690742..1692247 - 501 157961220 - Spea_1393 - amino acid/peptide transporter 1391 44.06 0 1692692..1693213 + 173 157961221 - Spea_1394 - transcriptional acivator RfaH 1392 44.13 0 1694703..1697498 + 931 157961222 - Spea_1395 - polysaccharide export protein 1393 40.28 -1 1697589..1697948 + 119 157961223 - Spea_1396 - hypothetical protein 1394 43.25 0 1698048..1699025 + 325 157961224 - Spea_1397 - lipopolysaccharide biosynthesis protein 1395 40.35 -1 1699269..1700366 + 365 157961225 - Spea_1398 - dTDP-glucose 4,6 dehydratase 1396 36.66 -2 1700366..1701238 + 290 157961226 - Spea_1399 - glucose-1-phosphate thymidylyltransferase 1397 33.08 -2 1701235..1701633 + 132 157961227 - Spea_1400 - WxcM domain-containing protein 1398 28.54 -2 1701618..1702076 + 152 157961228 - Spea_1401 - GCN5-related N-acetyltransferase 1399 30.85 -2 1702078..1703004 + 308 157961229 - Spea_1402 - hypothetical protein 1400 35.84 -2 1703001..1704116 + 371 157961230 - Spea_1403 - DegT/DnrJ/EryC1/StrS aminotransferase 1401 35.42 -2 1704129..1707101 + 990 157961231 - Spea_1404 - hypothetical protein 1402 36.03 -2 1707098..1707727 + 209 157961232 - Spea_1405 - peptidase C26 1403 36.11 -2 1707724..1708515 + 263 157961233 - Spea_1406 - nucleotidyl transferase 1404 31.72 -2 1708496..1709797 + 433 157961234 - Spea_1407 - CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 1405 34.92 -2 1709809..1711257 + 482 157961235 - Spea_1408 - polysaccharide biosynthesis protein 1406 33.61 -2 1711365..1712435 + 356 157961236 - Spea_1409 - glycosyl transferase group 1 1407 32.36 -2 1712484..1713719 + 411 157961237 - Spea_1410 - hypothetical protein 1408 32.49 -2 1713709..1714659 + 316 157961238 - Spea_1411 - glycosyl transferase family protein 1409 34.38 -2 1714661..1715428 + 255 157961239 - Spea_1412 - glycosyl transferase family protein 1410 37.20 -2 1715486..1716649 + 387 157961240 - Spea_1413 - DegT/DnrJ/EryC1/StrS aminotransferase 1411 34.34 -2 1716642..1717238 + 198 157961241 - Spea_1414 - sugar transferase 1412 44.44 0 1718393..1720336 + 647 157961242 - Spea_1416 - polysaccharide biosynthesis protein CapD 1413 44.00 0 1720905..1722413 - 502 157961243 - Spea_1417 - RNA-metabolising metallo-beta-lactamase 1414 40.70 -1 1722866..1724032 + 388 157961244 - Spea_1418 - UDP-glucose 6-dehydrogenase 1415 42.04 0 1724390..1725400 + 336 157961245 - Spea_1419 - NAD-dependent epimerase/dehydratase 1416 45.61 0 1725678..1726247 + 189 157961246 - Spea_1420 - dTDP-4-dehydrorhamnose 3,5-epimerase 1417 43.58 0 1726537..1727736 - 399 157961247 - Spea_1421 - CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 1418 43.64 0 1727790..1728245 - 151 157961248 - Spea_1422 - glycerol-3-phosphate cytidylyltransferase 1419 44.19 0 1728315..1729742 - 475 157961249 - Spea_1423 - nucleotidyl transferase 1420 44.75 0 1729753..1731924 - 723 157961250 - Spea_1424 - WecB/TagA/CpsF family glycosyl transferase 1421 45.53 0 1732177..1733250 - 357 157961251 - Spea_1425 - glycosyl transferase family protein 1422 47.08 0 1733240..1734607 - 455 157961252 - Spea_1426 - polysaccharide biosynthesis protein 1423 49.92 +1 1735201..1736448 - 415 157961253 - Spea_1427 - hypothetical protein 1424 47.62 0 1736406..1737812 - 468 157961254 - Spea_1428 - hypothetical protein 1425 48.70 +1 1737840..1739147 - 435 157961255 - Spea_1429 - polysaccharide export protein 1426 43.72 0 1739159..1739524 - 121 157961256 - Spea_1430 - anti-sigma-factor antagonist 1427 43.33 0 1740203..1740592 - 129 157961257 - Spea_1431 - putative anti-sigma regulatory factor, serine/threonine protein kinase 1428 44.85 0 1740608..1741831 - 407 157961258 - Spea_1432 - response regulator receiver modulated serine phosphatase 1429 47.92 0 1742026..1742889 + 287 157961259 - Spea_1433 - phosphonate ABC transporter, periplasmic phosphonate-binding protein 1430 44.90 0 1742889..1746449 + 1186 157961260 - Spea_1434 - multi-sensor hybrid histidine kinase 1431 46.16 0 1746558..1748054 + 498 157961261 - Spea_1435 - two component, sigma54 specific, Fis family transcriptional regulator 1432 45.85 0 1748151..1748933 + 260 157961262 - Spea_1436 - putative hydrolase 1433 45.42 0 1748985..1750076 + 363 157961263 - Spea_1437 - dTDP-4-dehydrorhamnose reductase 1434 48.53 +1 1750387..1751853 - 488 157961264 - Spea_1438 - hypothetical protein 1435 47.40 0 1752143..1754695 + 850 157961265 - Spea_1439 - glycoside hydrolase family 3 protein 1436 46.26 0 1754834..1755622 + 262 157961266 - Spea_1440 - 3'(2'),5'-bisphosphate nucleotidase 1437 47.68 0 1755727..1756632 + 301 157961267 - Spea_1441 - fructokinase 1438 46.69 0 1756797..1757567 + 256 157961268 - Spea_1442 - hypothetical protein 1439 44.89 0 1757890..1758564 + 224 157961269 - Spea_1443 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0