IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1322	 51.17	+1	1616998..1620114	-	1038	157961152	-	Spea_1324	-	acriflavin resistance protein
1323	 47.26	0	1620120..1621232	-	370	157961153	-	Spea_1325	-	RND family efflux transporter MFP subunit
1324	 46.44	0	1621419..1622036	+	205	157961154	-	Spea_1326	-	TetR family transcriptional regulator
1325	 47.57	0	1622099..1622674	-	191	157961155	-	Spea_1327	-	hypothetical protein
1326	 43.75	0	1622706..1623185	-	159	157961156	-	Spea_1328	-	hypothetical protein
1327	 46.48	0	1623485..1624237	+	250	157961157	-	Spea_1329	-	methyltransferase type 11
1328	 49.36	+1	1624590..1625843	+	417	157961158	-	Spea_1330	-	sodium:dicarboxylate symporter
1329	 38.75	-1	1625951..1626781	-	276	157961159	-	Spea_1331	-	fatty acid hydroxylase
1330	 46.75	0	1627615..1628784	-	389	157961160	-	Spea_1332	-	hypothetical protein
1331	 45.24	0	1629092..1629721	+	209	157961161	-	Spea_1333	-	hypothetical protein
1332	 49.44	+1	1629722..1630168	+	148	157961162	-	Spea_1334	-	hypothetical