version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1313 48.17 0 1602580..1603071 + 163 157961143 - Spea_1315 - CMP/dCMP deaminase zinc-binding 1314 48.96 +1 1603486..1604925 - 479 157961144 - Spea_1316 - lytic transglycosylase catalytic 1315 49.69 +1 1605218..1609099 + 1293 157961145 - Spea_1317 - phosphoribosylformylglycinamidine synthase 1316 45.41 0 1610325..1611881 + 518 157961146 - Spea_1318 - cytochrome bd ubiquinol oxidase subunit I 1317 46.14 0 1611897..1613036 + 379 157961147 - Spea_1319 - cytochrome d ubiquinol oxidase, subunit II 1318 42.74 0 1613052..1613168 + 38 157961148 - Spea_1320 - cyd operon protein YbgT 1319 43.11 0 1613671..1614243 - 190 157961149 - Spea_1321 - hypothetical protein 1320 47.90 0 1614466..1616469 - 667 157961150 - Spea_1322 - methyl-accepting chemotaxis sensory transducer 1321 43.14 0 1616760..1617014 + 84 157961151 - Spea_1323 - hypothetical protein 1322 51.17 +1 1616998..1620114 - 1038 157961152 - Spea_1324 - acriflavin resistance protein 1323 47.26 0 1620120..1621232 - 370 157961153 - Spea_1325 - RND family efflux transporter MFP subunit 1324 46.44 0 1621419..1622036 + 205 157961154 - Spea_1326 - TetR family transcriptional regulator 1325 47.57 0 1622099..1622674 - 191 157961155 - Spea_1327 - hypothetical protein 1326 43.75 0 1622706..1623185 - 159 157961156 - Spea_1328 - hypothetical protein 1327 46.48 0 1623485..1624237 + 250 157961157 - Spea_1329 - methyltransferase type 11 1328 49.36 +1 1624590..1625843 + 417 157961158 - Spea_1330 - sodium:dicarboxylate symporter 1329 38.75 -1 1625951..1626781 - 276 157961159 - Spea_1331 - fatty acid hydroxylase 1330 46.75 0 1627615..1628784 - 389 157961160 - Spea_1332 - hypothetical protein 1331 45.24 0 1629092..1629721 + 209 157961161 - Spea_1333 - hypothetical protein 1332 49.44 +1 1629722..1630168 + 148 157961162 - Spea_1334 - hypothetical protein 1333 42.02 0 1630556..1630981 - 141 157961163 - Spea_1335 - FlgN family protein 1334 43.40 0 1631078..1631395 - 105 157961164 - Spea_1336 - anti-sigma-28 factor, FlgM 1335 43.80 0 1631493..1632266 - 257 157961165 - Spea_1337 - flagellar basal body P-ring biosynthesis protein FlgA 1336 41.59 -1 1632477..1633397 + 306 157961166 - Spea_1338 - response regulator receiver modulated CheW protein 1337 44.72 0 1633537..1634370 + 277 157961167 - Spea_1339 - MCP methyltransferase, CheR-type 1338 44.61 0 1634536..1634934 + 132 157961168 - Spea_1340 - flagellar basal body rod protein FlgB 1339 44.84 0 1634937..1635353 + 138 157961169 - Spea_1341 - flagellar basal body rod protein FlgC 1340 47.11 0 1635379..1636191 + 270 157961170 - Spea_1342 - flagellar basal body rod modification protein 1341 47.80 0 1636277..1637638 + 453 157961171 - Spea_1343 - flagellar hook protein FlgE 1342 49.33 +1 1638295..1639038 + 247 157961172 - Spea_1344 - flagellar basal body rod protein FlgF 1343 45.25 0 1639049..1639837 + 262 157961173 - Spea_1345 - flagellar basal body rod protein FlgG 1344 46.94 0 1639881..1640534 + 217 157961174 - Spea_1346 - flagellar basal body L-ring protein 1345 48.58 +1 1640574..1641668 + 364 157961175 - Spea_1347 - flagellar basal body P-ring protein 1346 46.34 0 1641697..1642788 + 363 157961176 - Spea_1348 - peptidoglycan hydrolase 1347 47.79 0 1642832..1644754 + 640 157961177 - Spea_1349 - flagellar hook-associated protein FlgK 1348 45.72 0 1644839..1646041 + 400 157961178 - Spea_1350 - flagellar hook-associated protein FlgL 1349 46.67 0 1646348..1647532 + 394 157961179 - Spea_1351 - flagellin domain-containing protein 1350 46.45 0 1648279..1649460 + 393 157961180 - Spea_1352 - flagellin domain-containing protein 1351 42.19 0 1649673..1650146 + 157 157961181 - Spea_1353 - flagellar protein FlaG protein 1352 44.79 0 1650241..1651602 + 453 157961182 - Spea_1354 - flagellar hook-associated 2 domain-containing protein 1353 42.06 0 1651749..1652126 + 125 157961183 - Spea_1355 - hypothetical protein 1354 42.29 0 1652133..1652534 + 133 157961184 - Spea_1356 - flagellar protein FliS 1355 44.42 0 1652848..1654281 + 477 157961185 - Spea_1357 - sigma-54 dependent trancsriptional regulator 1356 46.42 0 1654839..1655954 + 371 157961186 - Spea_1358 - PAS/PAC sensor signal transduction histidine kinase 1357 48.26 0 1655947..1657299 + 450 157961187 - Spea_1359 - two component, sigma54 specific, Fis family transcriptional regulator 1358 43.24 0 1657813..1658145 + 110 157961188 - Spea_1360 - flagellar hook-basal body complex subunit FliE 1359 48.03 0 1658188..1659888 + 566 157961189 - Spea_1361 - flagellar MS-ring protein 1360 46.19 0 1659878..1660927 + 349 157961190 - Spea_1362 - flagellar motor switch protein G 1361 49.00 +1 1660927..1661877 + 316 157961191 - Spea_1363 - flagellar assembly protein FliH 1362 52.50 +2 1661849..1663189 + 446 157961192 - Spea_1364 - flagellum-specific ATP synthase 1363 49.44 +1 1663244..1663690 + 148 157961193 - Spea_1365 - flagellar export protein FliJ 1364 47.28 0 1663908..1665434 + 508 157961194 - Spea_1366 - flagellar hook-length control protein 1365 46.63 0 1665511..1666029 + 172 157961195 - Spea_1367 - flagellar basal body-associated protein FliL 1366 46.55 0 1666098..1667126 + 342 157961196 - Spea_1368 - flagellar motor switch protein FliM 1367 45.93 0 1667139..1667519 + 126 157961197 - Spea_1369 - flagellar motor switch protein 1368 47.47 0 1667547..1667921 + 124 157961198 - Spea_1370 - flagellar biosynthesis protein FliO 1369 43.47 0 1667932..1668681 + 249 157961199 - Spea_1371 - flagellar biosynthesis protein FliP 1370 44.07 0 1668689..1668958 + 89 157961200 - Spea_1372 - flagellar biosynthetic protein FliQ 1371 48.19 0 1668997..1669797 + 266 157961201 - Spea_1373 - flagellar biosynthesis protein FliR 1372 48.32 0 1669939..1671072 + 377 157961202 - Spea_1374 - flagellar biosynthesis protein FlhB 1373 49.81 +1 1671339..1673438 + 699 157961203 - Spea_1375 - flagellar biosynthesis protein FlhA 1374 44.66 0 1673450..1674862 + 470 157961204 - Spea_1376 - flagellar biosynthesis regulator FlhF 1375 46.37 0 1674867..1675748 + 293 157961205 - Spea_1377 - cobyrinic acid ac-diamide synthase 1376 46.67 0 1675741..1676460 + 239 157961206 - Spea_1378 - flagellar biosynthesis sigma factor 1377 44.85 0 1676497..1676904 + 135 157961207 - Spea_1379 - response regulator receiver protein 1378 41.87 -1 1676918..1677655 + 245 157961208 - Spea_1380 - chemotaxis phosphatase, CheZ 1379 46.36 0 1677668..1679893 + 741 157961209 - Spea_1381 - CheA signal transduction histidine kinase 1380 47.88 0 1679983..1681164 + 393 157961210 - Spea_1382 - chemotaxis-specific methylesterase 1381 43.67 0 1681157..1681843 + 228 157961211 - Spea_1383 - hypothetical protein 1382 44.32 0 1681984..1682775 + 263 157961212 - Spea_1384 - cobyrinic acid ac-diamide synthase 1383 45.32 0 1682759..1683676 + 305 157961213 - Spea_1385 - CheW protein 1384 42.89 0 1684185..1684676 + 163 157961214 - Spea_1386 - CheW protein 1385 45.19 0 1685059..1685463 + 134 157961215 - Spea_1387 - hypothetical protein 1386 47.90 0 1685881..1686189 - 102 157961216 - Spea_1388 - FlhB domain-containing protein 1387 41.18 -1 1686216..1687718 - 500 157961217 - Spea_1389 - hypothetical protein 1388 44.40 0 1688215..1688982 + 255 157961218 - Spea_1390 - VacJ family lipoprotein 1389 42.28 0 1689078..1690184 + 368 157961219 - Spea_1391 - response regulator receiver protein 1390 44.49 0 1690742..1692247 - 501 157961220 - Spea_1393 - amino acid/peptide transporter 1391 44.06 0 1692692..1693213 + 173 157961221 - Spea_1394 - transcriptional acivator RfaH 1392 44.13 0 1694703..1697498 + 931 157961222 - Spea_1395 - polysaccharide export protein 1393 40.28 -1 1697589..1697948 + 119 157961223 - Spea_1396 - hypothetical protein 1394 43.25 0 1698048..1699025 + 325 157961224 - Spea_1397 - lipopolysaccharide biosynthesis protein 1395 40.35 -1 1699269..1700366 + 365 157961225 - Spea_1398 - dTDP-glucose 4,6 dehydratase 1396 36.66 -2 1700366..1701238 + 290 157961226 - Spea_1399 - glucose-1-phosphate thymidylyltransferase 1397 33.08 -2 1701235..1701633 + 132 157961227 - Spea_1400 - WxcM domain-containing protein 1398 28.54 -2 1701618..1702076 + 152 157961228 - Spea_1401 - GCN5-related N-acetyltransferase 1399 30.85 -2 1702078..1703004 + 308 157961229 - Spea_1402 - hypothetical protein 1400 35.84 -2 1703001..1704116 + 371 157961230 - Spea_1403 - DegT/DnrJ/EryC1/StrS aminotransferase 1401 35.42 -2 1704129..1707101 + 990 157961231 - Spea_1404 - hypothetical protein 1402 36.03 -2 1707098..1707727 + 209 157961232 - Spea_1405 - peptidase C26 1403 36.11 -2 1707724..1708515 + 263 157961233 - Spea_1406 - nucleotidyl transferase 1404 31.72 -2 1708496..1709797 + 433 157961234 - Spea_1407 - CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 1405 34.92 -2 1709809..1711257 + 482 157961235 - Spea_1408 - polysaccharide biosynthesis protein 1406 33.61 -2 1711365..1712435 + 356 157961236 - Spea_1409 - glycosyl transferase group 1 1407 32.36 -2 1712484..1713719 + 411 157961237 - Spea_1410 - hypothetical protein 1408 32.49 -2 1713709..1714659 + 316 157961238 - Spea_1411 - glycosyl transferase family protein 1409 34.38 -2 1714661..1715428 + 255 157961239 - Spea_1412 - glycosyl transferase family protein 1410 37.20 -2 1715486..1716649 + 387 157961240 - Spea_1413 - DegT/DnrJ/EryC1/StrS aminotransferase 1411 34.34 -2 1716642..1717238 + 198 157961241 - Spea_1414 - sugar transferase 1412 44.44 0 1718393..1720336 + 647 157961242 - Spea_1416 - polysaccharide biosynthesis protein CapD 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0