IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1305	 44.28	0	1591696..1592316	+	206	157961135	-	Spea_1307	-	tetratricopeptide TPR_4
1306	 46.38	0	1592328..1593515	+	395	157961136	-	Spea_1308	-	outer membrane protein assembly complex subunit YfgL
1307	 48.47	+1	1593602..1595074	+	490	157961137	-	Spea_1309	-	GTP-binding protein EngA
1308	 40.00	-1	1595153..1595872	-	239	157961138	-	Spea_1310	-	hypothetical protein
1309	 39.42	-1	1596103..1597005	-	300	157961139	-	Spea_1311	-	hypothetical protein
1310	 50.30	+1	1597820..1599157	-	445	157961140	-	Spea_1312	-	exodeoxyribonuclease VII large subunit
1311	 46.84	0	1599278..1600750	+	490	157961141	-	Spea_1313	-	inositol-5-monophosphate dehydrogenase
1312	 46.70	0	1600874..1602451	+	525	157961142	-	Spea_1314	-	bifunctional GMP synthase/glutamine amidotransferase protein
1313	 48.17	0	1602580..1603071	+	163	157961143	-	Spea_1315	-	CMP/dCMP deaminase zinc-binding
1314	 48.96	+1	1603486..1604925	-	479	157961144	-	Spea_1316	-	lytic transglycosylase catalytic
1315	 49.69	+1	1605218..1609099	+	1293