IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1302	 48.76	+1	1588165..1589130	+	321	157961132	-	Spea_1304	-	hypothetical protein
1303	 46.95	0	1589152..1590267	+	371	157961133	-	Spea_1305	-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1304	 46.90	0	1590407..1591681	+	424	157961134	-	Spea_1306	-	histidyl-tRNA synthetase
1305	 44.28	0	1591696..1592316	+	206	157961135	-	Spea_1307	-	tetratricopeptide TPR_4
1306	 46.38	0	1592328..1593515	+	395	157961136	-	Spea_1308	-	outer membrane protein assembly complex subunit YfgL
1307	 48.47	+1	1593602..1595074	+	490	157961137	-	Spea_1309	-	GTP-binding protein EngA
1308	 40.00	-1	1595153..1595872	-	239	157961138	-	Spea_1310	-	hypothetical protein
1309	 39.42	-1	1596103..1597005	-	300	157961139	-	Spea_1311	-	hypothetical protein
1310	 50.30	+1	1597820..1599157	-	445	157961140	-	Spea_1312	-	exodeoxyribonuclease VII large subunit
1311	 46.84	0	1599278..1600750	+	490	157961141	-	Spea_1313	-	inositol-5-monophosphate dehydrogenase
1312	 46.70	0	1600874..1602451	+	525