IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1292	 40.09	-1	1578876..1579319	-	147	157961122	-	Spea_1294	-	CopG family transcriptional regulator
1293	 43.95	0	1579279..1580022	-	247	157961123	-	Spea_1295	-	hypothetical protein
1294	 38.67	-1	1580588..1580812	+	74	157961124	-	Spea_1296	-	hypothetical protein
1295	 42.57	0	1581020..1581322	+	100	157961125	-	Spea_1297	-	NrfJ-related protein
1296	 44.11	0	1581503..1582003	+	166	157961126	-	Spea_1298	-	GCN5-related N-acetyltransferase
1297	 44.01	0	1582088..1582630	+	180	157961127	-	Spea_1299	-	GCN5-related N-acetyltransferase
1298	 45.76	0	1582695..1584473	-	592	157961128	-	Spea_1300	-	5'-nucleotidase
1299	 42.58	0	1584981..1586051	-	356	157961129	-	Spea_1301	-	hypothetical protein
1300	 43.23	0	1586212..1587333	+	373	157961130	-	Spea_1302	-	hypothetical protein
1301	 44.44	0	1587365..1588165	+	266	157961131	-	Spea_1303	-	type IV pilus biogenesis/stability protein PilW
1302	 48.76	+1	1588165..1589130	+	321	157961132	-	Spea_1304	-	hypothetical pro