IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1279	 46.39	0	1564741..1565973	-	410	157961109	-	Spea_1281	-	integrase family protein
1280	 42.42	0	1566605..1567099	-	164	157961110	-	Spea_1282	-	SsrA-binding protein
1281	 43.52	0	1567293..1567724	+	143	157961111	-	Spea_1283	-	cyclase/dehydrase
1282	 44.14	0	1567721..1568053	+	110	157961112	-	Spea_1284	-	hypothetical protein
1283	 41.62	-1	1568161..1568655	-	164	157961113	-	Spea_1285	-	SmpA/OmlA domain-containing protein
1284	 48.26	0	1569121..1569924	+	267	157961114	-	Spea_1286	-	uroporphyrin-III C/tetrapyrrole methyltransferase
1285	 48.48	+1	1570060..1570224	+	54	157961115	-	Spea_1287	-	hypothetical protein
1286	 39.91	-1	1570480..1570692	+	70	157961116	-	Spea_1288	-	hypothetical protein
1287	 40.32	-1	1570703..1572490	+	595	157961117	-	Spea_1289	-	diguanylate cyclase
1288	 46.97	0	1573642..1575306	+	554	157961118	-	Spea_1290	-	malate synthase
1289	 44.11	0	1575736..1577211	+	491	157961119	-	Spea_1291	-	putative signal transduction protein
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