version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1279 46.39 0 1564741..1565973 - 410 157961109 - Spea_1281 - integrase family protein 1280 42.42 0 1566605..1567099 - 164 157961110 - Spea_1282 - SsrA-binding protein 1281 43.52 0 1567293..1567724 + 143 157961111 - Spea_1283 - cyclase/dehydrase 1282 44.14 0 1567721..1568053 + 110 157961112 - Spea_1284 - hypothetical protein 1283 41.62 -1 1568161..1568655 - 164 157961113 - Spea_1285 - SmpA/OmlA domain-containing protein 1284 48.26 0 1569121..1569924 + 267 157961114 - Spea_1286 - uroporphyrin-III C/tetrapyrrole methyltransferase 1285 48.48 +1 1570060..1570224 + 54 157961115 - Spea_1287 - hypothetical protein 1286 39.91 -1 1570480..1570692 + 70 157961116 - Spea_1288 - hypothetical protein 1287 40.32 -1 1570703..1572490 + 595 157961117 - Spea_1289 - diguanylate cyclase 1288 46.97 0 1573642..1575306 + 554 157961118 - Spea_1290 - malate synthase 1289 44.11 0 1575736..1577211 + 491 157961119 - Spea_1291 - putative signal transduction protein 1290 42.59 0 1577264..1577749 - 161 157961120 - Spea_1292 - hypothetical protein 1291 44.24 0 1577807..1578631 - 274 157961121 - Spea_1293 - hypothetical protein 1292 40.09 -1 1578876..1579319 - 147 157961122 - Spea_1294 - CopG family transcriptional regulator 1293 43.95 0 1579279..1580022 - 247 157961123 - Spea_1295 - hypothetical protein 1294 38.67 -1 1580588..1580812 + 74 157961124 - Spea_1296 - hypothetical protein 1295 42.57 0 1581020..1581322 + 100 157961125 - Spea_1297 - NrfJ-related protein 1296 44.11 0 1581503..1582003 + 166 157961126 - Spea_1298 - GCN5-related N-acetyltransferase 1297 44.01 0 1582088..1582630 + 180 157961127 - Spea_1299 - GCN5-related N-acetyltransferase 1298 45.76 0 1582695..1584473 - 592 157961128 - Spea_1300 - 5'-nucleotidase 1299 42.58 0 1584981..1586051 - 356 157961129 - Spea_1301 - hypothetical protein 1300 43.23 0 1586212..1587333 + 373 157961130 - Spea_1302 - hypothetical protein 1301 44.44 0 1587365..1588165 + 266 157961131 - Spea_1303 - type IV pilus biogenesis/stability protein PilW 1302 48.76 +1 1588165..1589130 + 321 157961132 - Spea_1304 - hypothetical protein 1303 46.95 0 1589152..1590267 + 371 157961133 - Spea_1305 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1304 46.90 0 1590407..1591681 + 424 157961134 - Spea_1306 - histidyl-tRNA synthetase 1305 44.28 0 1591696..1592316 + 206 157961135 - Spea_1307 - tetratricopeptide TPR_4 1306 46.38 0 1592328..1593515 + 395 157961136 - Spea_1308 - outer membrane protein assembly complex subunit YfgL 1307 48.47 +1 1593602..1595074 + 490 157961137 - Spea_1309 - GTP-binding protein EngA 1308 40.00 -1 1595153..1595872 - 239 157961138 - Spea_1310 - hypothetical protein 1309 39.42 -1 1596103..1597005 - 300 157961139 - Spea_1311 - hypothetical protein 1310 50.30 +1 1597820..1599157 - 445 157961140 - Spea_1312 - exodeoxyribonuclease VII large subunit 1311 46.84 0 1599278..1600750 + 490 157961141 - Spea_1313 - inositol-5-monophosphate dehydrogenase 1312 46.70 0 1600874..1602451 + 525 157961142 - Spea_1314 - bifunctional GMP synthase/glutamine amidotransferase protein 1313 48.17 0 1602580..1603071 + 163 157961143 - Spea_1315 - CMP/dCMP deaminase zinc-binding 1314 48.96 +1 1603486..1604925 - 479 157961144 - Spea_1316 - lytic transglycosylase catalytic 1315 49.69 +1 1605218..1609099 + 1293 157961145 - Spea_1317 - phosphoribosylformylglycinamidine synthase 1316 45.41 0 1610325..1611881 + 518 157961146 - Spea_1318 - cytochrome bd ubiquinol oxidase subunit I 1317 46.14 0 1611897..1613036 + 379 157961147 - Spea_1319 - cytochrome d ubiquinol oxidase, subunit II 1318 42.74 0 1613052..1613168 + 38 157961148 - Spea_1320 - cyd operon protein YbgT 1319 43.11 0 1613671..1614243 - 190 157961149 - Spea_1321 - hypothetical protein 1320 47.90 0 1614466..1616469 - 667 157961150 - Spea_1322 - methyl-accepting chemotaxis sensory transducer 1321 43.14 0 1616760..1617014 + 84 157961151 - Spea_1323 - hypothetical protein 1322 51.17 +1 1616998..1620114 - 1038 157961152 - Spea_1324 - acriflavin resistance protein 1323 47.26 0 1620120..1621232 - 370 157961153 - Spea_1325 - RND family efflux transporter MFP subunit 1324 46.44 0 1621419..1622036 + 205 157961154 - Spea_1326 - TetR family transcriptional regulator 1325 47.57 0 1622099..1622674 - 191 157961155 - Spea_1327 - hypothetical protein 1326 43.75 0 1622706..1623185 - 159 157961156 - Spea_1328 - hypothetical protein 1327 46.48 0 1623485..1624237 + 250 157961157 - Spea_1329 - methyltransferase type 11 1328 49.36 +1 1624590..1625843 + 417 157961158 - Spea_1330 - sodium:dicarboxylate symporter 1329 38.75 -1 1625951..1626781 - 276 157961159 - Spea_1331 - fatty acid hydroxylase 1330 46.75 0 1627615..1628784 - 389 157961160 - Spea_1332 - hypothetical protein 1331 45.24 0 1629092..1629721 + 209 157961161 - Spea_1333 - hypothetical protein 1332 49.44 +1 1629722..1630168 + 148 157961162 - Spea_1334 - hypothetical protein 1333 42.02 0 1630556..1630981 - 141 157961163 - Spea_1335 - FlgN family protein 1334 43.40 0 1631078..1631395 - 105 157961164 - Spea_1336 - anti-sigma-28 factor, FlgM 1335 43.80 0 1631493..1632266 - 257 157961165 - Spea_1337 - flagellar basal body P-ring biosynthesis protein FlgA 1336 41.59 -1 1632477..1633397 + 306 157961166 - Spea_1338 - response regulator receiver modulated CheW protein 1337 44.72 0 1633537..1634370 + 277 157961167 - Spea_1339 - MCP methyltransferase, CheR-type 1338 44.61 0 1634536..1634934 + 132 157961168 - Spea_1340 - flagellar basal body rod protein FlgB 1339 44.84 0 1634937..1635353 + 138 157961169 - Spea_1341 - flagellar basal body rod protein FlgC 1340 47.11 0 1635379..1636191 + 270 157961170 - Spea_1342 - flagellar basal body rod modification protein 1341 47.80 0 1636277..1637638 + 453 157961171 - Spea_1343 - flagellar hook protein FlgE 1342 49.33 +1 1638295..1639038 + 247 157961172 - Spea_1344 - flagellar basal body rod protein FlgF 1343 45.25 0 1639049..1639837 + 262 157961173 - Spea_1345 - flagellar basal body rod protein FlgG 1344 46.94 0 1639881..1640534 + 217 157961174 - Spea_1346 - flagellar basal body L-ring protein 1345 48.58 +1 1640574..1641668 + 364 157961175 - Spea_1347 - flagellar basal body P-ring protein 1346 46.34 0 1641697..1642788 + 363 157961176 - Spea_1348 - peptidoglycan hydrolase 1347 47.79 0 1642832..1644754 + 640 157961177 - Spea_1349 - flagellar hook-associated protein FlgK 1348 45.72 0 1644839..1646041 + 400 157961178 - Spea_1350 - flagellar hook-associated protein FlgL 1349 46.67 0 1646348..1647532 + 394 157961179 - Spea_1351 - flagellin domain-containing protein 1350 46.45 0 1648279..1649460 + 393 157961180 - Spea_1352 - flagellin domain-containing protein 1351 42.19 0 1649673..1650146 + 157 157961181 - Spea_1353 - flagellar protein FlaG protein 1352 44.79 0 1650241..1651602 + 453 157961182 - Spea_1354 - flagellar hook-associated 2 domain-containing protein 1353 42.06 0 1651749..1652126 + 125 157961183 - Spea_1355 - hypothetical protein 1354 42.29 0 1652133..1652534 + 133 157961184 - Spea_1356 - flagellar protein FliS 1355 44.42 0 1652848..1654281 + 477 157961185 - Spea_1357 - sigma-54 dependent trancsriptional regulator 1356 46.42 0 1654839..1655954 + 371 157961186 - Spea_1358 - PAS/PAC sensor signal transduction histidine kinase 1357 48.26 0 1655947..1657299 + 450 157961187 - Spea_1359 - two component, sigma54 specific, Fis family transcriptional regulator 1358 43.24 0 1657813..1658145 + 110 157961188 - Spea_1360 - flagellar hook-basal body complex subunit FliE 1359 48.03 0 1658188..1659888 + 566 157961189 - Spea_1361 - flagellar MS-ring protein 1360 46.19 0 1659878..1660927 + 349 157961190 - Spea_1362 - flagellar motor switch protein G 1361 49.00 +1 1660927..1661877 + 316 157961191 - Spea_1363 - flagellar assembly protein FliH 1362 52.50 +2 1661849..1663189 + 446 157961192 - Spea_1364 - flagellum-specific ATP synthase 1363 49.44 +1 1663244..1663690 + 148 157961193 - Spea_1365 - flagellar export protein FliJ 1364 47.28 0 1663908..1665434 + 508 157961194 - Spea_1366 - flagellar hook-length control protein 1365 46.63 0 1665511..1666029 + 172 157961195 - Spea_1367 - flagellar basal body-associated protein FliL 1366 46.55 0 1666098..1667126 + 342 157961196 - Spea_1368 - flagellar motor switch protein FliM 1367 45.93 0 1667139..1667519 + 126 157961197 - Spea_1369 - flagellar motor switch protein 1368 47.47 0 1667547..1667921 + 124 157961198 - Spea_1370 - flagellar biosynthesis protein FliO 1369 43.47 0 1667932..1668681 + 249 157961199 - Spea_1371 - flagellar biosynthesis protein FliP 1370 44.07 0 1668689..1668958 + 89 157961200 - Spea_1372 - flagellar biosynthetic protein FliQ 1371 48.19 0 1668997..1669797 + 266 157961201 - Spea_1373 - flagellar biosynthesis protein FliR 1372 48.32 0 1669939..1671072 + 377 157961202 - Spea_1374 - flagellar biosynthesis protein FlhB 1373 49.81 +1 1671339..1673438 + 699 157961203 - Spea_1375 - flagellar biosynthesis protein FlhA 1374 44.66 0 1673450..1674862 + 470 157961204 - Spea_1376 - flagellar biosynthesis regulator FlhF 1375 46.37 0 1674867..1675748 + 293 157961205 - Spea_1377 - cobyrinic acid ac-diamide synthase 1376 46.67 0 1675741..1676460 + 239 157961206 - Spea_1378 - flagellar biosynthesis sigma factor 1377 44.85 0 1676497..1676904 + 135 157961207 - Spea_1379 - response regulator receiver protein 1378 41.87 -1 1676918..1677655 + 245 157961208 - Spea_1380 - chemotaxis phosphatase, CheZ 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0