IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1268	 42.42	0	1546309..1547529	+	406	157961098	-	Spea_1270	-	DNA-cytosine methyltransferase
1269	 45.73	0	1547568..1551101	+	1177	157961099	-	Spea_1271	-	helicase domain-containing protein
1270	 44.63	0	1551112..1555173	+	1353	157961100	-	Spea_1272	-	hypothetical protein
1271	 47.13	0	1555239..1558805	+	1188	157961101	-	Spea_1273	-	helicase domain-containing protein
1272	 45.45	0	1558802..1560625	+	607	157961102	-	Spea_1274	-	hypothetical protein
1273	 45.00	0	1560622..1561461	+	279	157961103	-	Spea_1275	-	hypothetical protein
1274	 39.13	-1	1561552..1562637	+	361	157961104	-	Spea_1276	-	hypothetical protein
1275	 36.87	-2	1562630..1563025	+	131	157961105	-	Spea_1277	-	hypothetical protein
1276	 35.33	-2	1563144..1563494	-	116	157961106	-	Spea_1278	-	hypothetical protein
1277	 37.25	-2	1563727..1564083	-	118	157961107	-	Spea_1279	-	XRE family transcriptional regulator
1278	 38.99	-1	1564202..1564696	+	164	157961108	-	Spea_1280	-	hypothetical protei