IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1248	 41.39	-1	1523743..1524276	+	177	157961078	-	Spea_1250	-	alkylhydroperoxidase
1249	 38.36	-2	1524295..1524732	+	145	157961079	-	Spea_1251	-	hypothetical protein
1250	 33.62	-2	1524818..1525516	-	232	157961080	-	Spea_1252	-	hypothetical protein
1251	 35.14	-2	1525654..1527147	+	497	157961081	-	Spea_1253	-	hypothetical protein
1252	 37.48	-2	1527312..1527938	+	208	157961082	-	Spea_1254	-	transposase
1253	 39.75	-1	1527993..1528553	-	186	157961083	-	Spea_1255	-	integrase family protein
1254	 44.69	0	1528687..1529100	-	137	157961084	-	Spea_1256	-	hypothetical protein
1255	 50.29	+1	1529279..1529620	-	113	157961085	-	Spea_1257	-	hypothetical protein
1256	 46.01	0	1529734..1530096	-	120	157961086	-	Spea_1258	-	hypothetical protein
1257	 45.07	0	1530156..1530632	-	158	157961087	-	Spea_1259	-	DNA repair protein RadC
1258	 40.69	-1	1530827..1531030	+	67	157961088	-	Spea_1260	-	phage transcriptional regulator, AlpA
1259	 45.21	0	1531543..1531761	-	72