version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1244 47.54 0 1519846..1520373 + 175 157961074 - Spea_1246 - PEBP family protein 1245 44.44 0 1520438..1521247 + 269 157961075 - Spea_1247 - AraC family transcriptional regulator 1246 40.64 -1 1522011..1522352 + 113 157961076 - Spea_1248 - alkylphosphonate utilization operon protein PhnA 1247 41.57 -1 1522829..1523641 - 270 157961077 - Spea_1249 - AraC family transcriptional regulator 1248 41.39 -1 1523743..1524276 + 177 157961078 - Spea_1250 - alkylhydroperoxidase 1249 38.36 -2 1524295..1524732 + 145 157961079 - Spea_1251 - hypothetical protein 1250 33.62 -2 1524818..1525516 - 232 157961080 - Spea_1252 - hypothetical protein 1251 35.14 -2 1525654..1527147 + 497 157961081 - Spea_1253 - hypothetical protein 1252 37.48 -2 1527312..1527938 + 208 157961082 - Spea_1254 - transposase 1253 39.75 -1 1527993..1528553 - 186 157961083 - Spea_1255 - integrase family protein 1254 44.69 0 1528687..1529100 - 137 157961084 - Spea_1256 - hypothetical protein 1255 50.29 +1 1529279..1529620 - 113 157961085 - Spea_1257 - hypothetical protein 1256 46.01 0 1529734..1530096 - 120 157961086 - Spea_1258 - hypothetical protein 1257 45.07 0 1530156..1530632 - 158 157961087 - Spea_1259 - DNA repair protein RadC 1258 40.69 -1 1530827..1531030 + 67 157961088 - Spea_1260 - phage transcriptional regulator, AlpA 1259 45.21 0 1531543..1531761 - 72 157961089 - Spea_1261 - hypothetical protein 1260 39.93 -1 1532360..1533223 - 287 157961090 - Spea_1262 - hypothetical protein 1261 42.88 0 1533379..1534656 + 425 157961091 - Spea_1263 - hypothetical protein 1262 42.11 0 1534646..1535215 + 189 157961092 - Spea_1264 - hypothetical protein 1263 41.10 -1 1535209..1538001 + 930 157961093 - Spea_1265 - hypothetical protein 1264 45.39 0 1537998..1538876 + 292 157961094 - Spea_1266 - hypothetical protein 1265 40.61 -1 1539298..1540548 + 416 157961095 - Spea_1267 - hypothetical protein 1266 42.49 0 1540535..1542358 + 607 157961096 - Spea_1268 - hypothetical protein 1267 41.22 -1 1542400..1545645 + 1081 157961097 - Spea_1269 - helicase domain-containing protein 1268 42.42 0 1546309..1547529 + 406 157961098 - Spea_1270 - DNA-cytosine methyltransferase 1269 45.73 0 1547568..1551101 + 1177 157961099 - Spea_1271 - helicase domain-containing protein 1270 44.63 0 1551112..1555173 + 1353 157961100 - Spea_1272 - hypothetical protein 1271 47.13 0 1555239..1558805 + 1188 157961101 - Spea_1273 - helicase domain-containing protein 1272 45.45 0 1558802..1560625 + 607 157961102 - Spea_1274 - hypothetical protein 1273 45.00 0 1560622..1561461 + 279 157961103 - Spea_1275 - hypothetical protein 1274 39.13 -1 1561552..1562637 + 361 157961104 - Spea_1276 - hypothetical protein 1275 36.87 -2 1562630..1563025 + 131 157961105 - Spea_1277 - hypothetical protein 1276 35.33 -2 1563144..1563494 - 116 157961106 - Spea_1278 - hypothetical protein 1277 37.25 -2 1563727..1564083 - 118 157961107 - Spea_1279 - XRE family transcriptional regulator 1278 38.99 -1 1564202..1564696 + 164 157961108 - Spea_1280 - hypothetical protein 1279 46.39 0 1564741..1565973 - 410 157961109 - Spea_1281 - integrase family protein 1280 42.42 0 1566605..1567099 - 164 157961110 - Spea_1282 - SsrA-binding protein 1281 43.52 0 1567293..1567724 + 143 157961111 - Spea_1283 - cyclase/dehydrase 1282 44.14 0 1567721..1568053 + 110 157961112 - Spea_1284 - hypothetical protein 1283 41.62 -1 1568161..1568655 - 164 157961113 - Spea_1285 - SmpA/OmlA domain-containing protein 1284 48.26 0 1569121..1569924 + 267 157961114 - Spea_1286 - uroporphyrin-III C/tetrapyrrole methyltransferase 1285 48.48 +1 1570060..1570224 + 54 157961115 - Spea_1287 - hypothetical protein 1286 39.91 -1 1570480..1570692 + 70 157961116 - Spea_1288 - hypothetical protein 1287 40.32 -1 1570703..1572490 + 595 157961117 - Spea_1289 - diguanylate cyclase 1288 46.97 0 1573642..1575306 + 554 157961118 - Spea_1290 - malate synthase 1289 44.11 0 1575736..1577211 + 491 157961119 - Spea_1291 - putative signal transduction protein 1290 42.59 0 1577264..1577749 - 161 157961120 - Spea_1292 - hypothetical protein 1291 44.24 0 1577807..1578631 - 274 157961121 - Spea_1293 - hypothetical protein 1292 40.09 -1 1578876..1579319 - 147 157961122 - Spea_1294 - CopG family transcriptional regulator 1293 43.95 0 1579279..1580022 - 247 157961123 - Spea_1295 - hypothetical protein 1294 38.67 -1 1580588..1580812 + 74 157961124 - Spea_1296 - hypothetical protein 1295 42.57 0 1581020..1581322 + 100 157961125 - Spea_1297 - NrfJ-related protein 1296 44.11 0 1581503..1582003 + 166 157961126 - Spea_1298 - GCN5-related N-acetyltransferase 1297 44.01 0 1582088..1582630 + 180 157961127 - Spea_1299 - GCN5-related N-acetyltransferase 1298 45.76 0 1582695..1584473 - 592 157961128 - Spea_1300 - 5'-nucleotidase 1299 42.58 0 1584981..1586051 - 356 157961129 - Spea_1301 - hypothetical protein 1300 43.23 0 1586212..1587333 + 373 157961130 - Spea_1302 - hypothetical protein 1301 44.44 0 1587365..1588165 + 266 157961131 - Spea_1303 - type IV pilus biogenesis/stability protein PilW 1302 48.76 +1 1588165..1589130 + 321 157961132 - Spea_1304 - hypothetical protein 1303 46.95 0 1589152..1590267 + 371 157961133 - Spea_1305 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1304 46.90 0 1590407..1591681 + 424 157961134 - Spea_1306 - histidyl-tRNA synthetase 1305 44.28 0 1591696..1592316 + 206 157961135 - Spea_1307 - tetratricopeptide TPR_4 1306 46.38 0 1592328..1593515 + 395 157961136 - Spea_1308 - outer membrane protein assembly complex subunit YfgL 1307 48.47 +1 1593602..1595074 + 490 157961137 - Spea_1309 - GTP-binding protein EngA 1308 40.00 -1 1595153..1595872 - 239 157961138 - Spea_1310 - hypothetical protein 1309 39.42 -1 1596103..1597005 - 300 157961139 - Spea_1311 - hypothetical protein 1310 50.30 +1 1597820..1599157 - 445 157961140 - Spea_1312 - exodeoxyribonuclease VII large subunit 1311 46.84 0 1599278..1600750 + 490 157961141 - Spea_1313 - inositol-5-monophosphate dehydrogenase 1312 46.70 0 1600874..1602451 + 525 157961142 - Spea_1314 - bifunctional GMP synthase/glutamine amidotransferase protein 1313 48.17 0 1602580..1603071 + 163 157961143 - Spea_1315 - CMP/dCMP deaminase zinc-binding 1314 48.96 +1 1603486..1604925 - 479 157961144 - Spea_1316 - lytic transglycosylase catalytic 1315 49.69 +1 1605218..1609099 + 1293 157961145 - Spea_1317 - phosphoribosylformylglycinamidine synthase 1316 45.41 0 1610325..1611881 + 518 157961146 - Spea_1318 - cytochrome bd ubiquinol oxidase subunit I 1317 46.14 0 1611897..1613036 + 379 157961147 - Spea_1319 - cytochrome d ubiquinol oxidase, subunit II 1318 42.74 0 1613052..1613168 + 38 157961148 - Spea_1320 - cyd operon protein YbgT 1319 43.11 0 1613671..1614243 - 190 157961149 - Spea_1321 - hypothetical protein 1320 47.90 0 1614466..1616469 - 667 157961150 - Spea_1322 - methyl-accepting chemotaxis sensory transducer 1321 43.14 0 1616760..1617014 + 84 157961151 - Spea_1323 - hypothetical protein 1322 51.17 +1 1616998..1620114 - 1038 157961152 - Spea_1324 - acriflavin resistance protein 1323 47.26 0 1620120..1621232 - 370 157961153 - Spea_1325 - RND family efflux transporter MFP subunit 1324 46.44 0 1621419..1622036 + 205 157961154 - Spea_1326 - TetR family transcriptional regulator 1325 47.57 0 1622099..1622674 - 191 157961155 - Spea_1327 - hypothetical protein 1326 43.75 0 1622706..1623185 - 159 157961156 - Spea_1328 - hypothetical protein 1327 46.48 0 1623485..1624237 + 250 157961157 - Spea_1329 - methyltransferase type 11 1328 49.36 +1 1624590..1625843 + 417 157961158 - Spea_1330 - sodium:dicarboxylate symporter 1329 38.75 -1 1625951..1626781 - 276 157961159 - Spea_1331 - fatty acid hydroxylase 1330 46.75 0 1627615..1628784 - 389 157961160 - Spea_1332 - hypothetical protein 1331 45.24 0 1629092..1629721 + 209 157961161 - Spea_1333 - hypothetical protein 1332 49.44 +1 1629722..1630168 + 148 157961162 - Spea_1334 - hypothetical protein 1333 42.02 0 1630556..1630981 - 141 157961163 - Spea_1335 - FlgN family protein 1334 43.40 0 1631078..1631395 - 105 157961164 - Spea_1336 - anti-sigma-28 factor, FlgM 1335 43.80 0 1631493..1632266 - 257 157961165 - Spea_1337 - flagellar basal body P-ring biosynthesis protein FlgA 1336 41.59 -1 1632477..1633397 + 306 157961166 - Spea_1338 - response regulator receiver modulated CheW protein 1337 44.72 0 1633537..1634370 + 277 157961167 - Spea_1339 - MCP methyltransferase, CheR-type 1338 44.61 0 1634536..1634934 + 132 157961168 - Spea_1340 - flagellar basal body rod protein FlgB 1339 44.84 0 1634937..1635353 + 138 157961169 - Spea_1341 - flagellar basal body rod protein FlgC 1340 47.11 0 1635379..1636191 + 270 157961170 - Spea_1342 - flagellar basal body rod modification protein 1341 47.80 0 1636277..1637638 + 453 157961171 - Spea_1343 - flagellar hook protein FlgE 1342 49.33 +1 1638295..1639038 + 247 157961172 - Spea_1344 - flagellar basal body rod protein FlgF 1343 45.25 0 1639049..1639837 + 262 157961173 - Spea_1345 - flagellar basal body rod protein FlgG 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0