IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1243	 48.29	0	1518901..1519629	+	242	157961073	-	Spea_1245	-	nitroreductase A
1244	 47.54	0	1519846..1520373	+	175	157961074	-	Spea_1246	-	PEBP family protein
1245	 44.44	0	1520438..1521247	+	269	157961075	-	Spea_1247	-	AraC family transcriptional regulator
1246	 40.64	-1	1522011..1522352	+	113	157961076	-	Spea_1248	-	alkylphosphonate utilization operon protein PhnA
1247	 41.57	-1	1522829..1523641	-	270	157961077	-	Spea_1249	-	AraC family transcriptional regulator
1248	 41.39	-1	1523743..1524276	+	177	157961078	-	Spea_1250	-	alkylhydroperoxidase
1249	 38.36	-2	1524295..1524732	+	145	157961079	-	Spea_1251	-	hypothetical protein
1250	 33.62	-2	1524818..1525516	-	232	157961080	-	Spea_1252	-	hypothetical protein
1251	 35.14	-2	1525654..1527147	+	497	157961081	-	Spea_1253	-	hypothetical protein
1252	 37.48	-2	1527312..1527938	+	208	157961082	-	Spea_1254	-	transposase
1253	 39.75	-1	1527993..1528553	-	186	157961083	-	Spea_1255	-	integrase family protein