IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1239	 47.35	0	1514218..1515216	-	332	157961069	-	Spea_1241	-	hypothetical protein
1240	 38.82	-1	1515607..1516335	+	242	157961070	-	Spea_1242	-	hypothetical protein
1241	 40.67	-1	1516340..1517866	+	508	157961071	-	Spea_1243	-	diguanylate phosphodiesterase
1242	 42.07	0	1518035..1518595	-	186	157961072	-	Spea_1244	-	CBS domain-containing protein
1243	 48.29	0	1518901..1519629	+	242	157961073	-	Spea_1245	-	nitroreductase A
1244	 47.54	0	1519846..1520373	+	175	157961074	-	Spea_1246	-	PEBP family protein
1245	 44.44	0	1520438..1521247	+	269	157961075	-	Spea_1247	-	AraC family transcriptional regulator
1246	 40.64	-1	1522011..1522352	+	113	157961076	-	Spea_1248	-	alkylphosphonate utilization operon protein PhnA
1247	 41.57	-1	1522829..1523641	-	270	157961077	-	Spea_1249	-	AraC family transcriptional regulator
1248	 41.39	-1	1523743..1524276	+	177	157961078	-	Spea_1250	-	alkylhydroperoxidase
1249	 38.36	-2	1524295..1524732	+	145	157961079	-	Spea_1251	-