IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1235	 48.38	0	1507332..1509491	-	719	157961065	-	Spea_1237	-	hypothetical protein
1236	 45.06	0	1509927..1511111	+	394	157961066	-	Spea_1238	-	glycosyl transferase group 1
1237	 43.92	0	1511101..1513311	+	736	157961067	-	Spea_1239	-	extracellular solute-binding protein
1238	 43.31	0	1513360..1514181	+	273	157961068	-	Spea_1240	-	hypothetical protein
1239	 47.35	0	1514218..1515216	-	332	157961069	-	Spea_1241	-	hypothetical protein
1240	 38.82	-1	1515607..1516335	+	242	157961070	-	Spea_1242	-	hypothetical protein
1241	 40.67	-1	1516340..1517866	+	508	157961071	-	Spea_1243	-	diguanylate phosphodiesterase
1242	 42.07	0	1518035..1518595	-	186	157961072	-	Spea_1244	-	CBS domain-containing protein
1243	 48.29	0	1518901..1519629	+	242	157961073	-	Spea_1245	-	nitroreductase A
1244	 47.54	0	1519846..1520373	+	175	157961074	-	Spea_1246	-	PEBP family protein
1245	 44.44	0	1520438..1521247	+	269	157961075	-	Spea_1247	-	AraC family transcriptional regulator
1246