IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1225	 47.03	0	1492366..1493577	+	403	157961055	-	Spea_1227	-	NnrS family protein
1226	 48.87	+1	1493670..1495079	+	469	157961056	-	Spea_1228	-	nitrite reductase (cytochrome; ammonia-forming)
1227	 41.72	-1	1495344..1495832	+	162	157961057	-	Spea_1229	-	hypothetical protein
1228	 48.34	0	1495878..1496930	+	350	157961058	-	Spea_1230	-	AraC family transcriptional regulator
1229	 48.78	+1	1497064..1499076	+	670	157961059	-	Spea_1231	-	beta-lactamase domain-containing protein
1230	 33.58	-2	1499742..1500542	-	266	157961060	-	Spea_1232	-	hypothetical protein
1231	 37.32	-2	1500535..1501386	-	283	157961061	-	Spea_1233	-	hypothetical protein
1232	 47.59	0	1502313..1504550	-	745	157961062	-	Spea_1234	-	acyl-CoA dehydrogenase
1233	 46.89	0	1504994..1506181	-	395	157961063	-	Spea_1235	-	ribosome-associated GTPase
1234	 44.51	0	1506793..1507320	-	175	157961064	-	Spea_1236	-	putative lipoprotein
1235	 48.38	0	1507332..1509491	-	719	157961065	-	Spea_1237	-	hypot