IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
79	 46.14	0	88938..89351	-	137	157959909	-	Spea_0079	-	hypothetical protein
80	 51.57	+1	89366..90703	-	445	157959910	-	Spea_0080	-	FliI/YscN family ATPase
81	 49.47	+1	90681..91436	-	251	157959911	-	Spea_0081	-	flagellar assembly protein H
82	 48.32	0	91436..92449	-	337	157959912	-	Spea_0082	-	flagellar motor switch protein G
83	 48.44	0	92510..94210	-	566	157959913	-	Spea_0083	-	flagellar MS-ring protein
84	 46.02	0	94286..94624	-	112	157959914	-	Spea_0084	-	flagellar hook-basal body complex subunit FliE
85	 48.55	+1	94655..95962	-	435	157959915	-	Spea_0085	-	sigma-54 dependent trancsriptional regulator
86	 47.26	0	95949..96860	-	303	157959916	-	Spea_0086	-	OmpA/MotB domain-containing protein
87	 45.69	0	97405..98286	+	293	157959917	-	Spea_0087	-	hypothetical protein
88	 43.70	0	98279..98635	+	118	157959918	-	Spea_0088	-	flagellar motor switch protein FliN
89	 45.82	0	98638..99366	+	242	157959919	-	Spea_0089	-	flagellar biosynthesis protein FliP
90	 46.30	0	99553..998