IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1210	 43.85	0	1475962..1476579	+	205	157961040	-	Spea_1212	-	ECF subfamily RNA polymerase sigma-24 factor
1211	 46.56	0	1476569..1477135	+	188	157961041	-	Spea_1213	-	hypothetical protein
1212	 41.73	-1	1477295..1477711	-	138	157961042	-	Spea_1214	-	hypothetical protein
1213	 49.16	+1	1477930..1481208	+	1092	157961043	-	Spea_1215	-	peptidase S41
1214	 47.66	0	1481454..1482605	+	383	157961044	-	Spea_1216	-	secretion protein HlyD family protein
1215	 46.31	0	1482595..1483665	+	356	157961045	-	Spea_1217	-	hypothetical protein
1216	 48.21	0	1483957..1484541	+	194	157961046	-	Spea_1218	-	putative lipoprotein
1217	 41.67	-1	1484621..1485064	-	147	157961047	-	Spea_1219	-	OsmC family protein
1218	 46.97	0	1485341..1485868	-	175	157961048	-	Spea_1220	-	hypothetical protein
1219	 42.51	0	1486118..1486444	-	108	157961049	-	Spea_1221	-	hypothetical protein
1220	 46.65	0	1486448..1488091	-	547	157961050	-	Spea_1222	-	PepSY-associated TM helix domain-containing