IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1203	 39.78	-1	1466713..1466898	-	61	157961033	-	Spea_1205	-	hypothetical protein
1204	 47.32	0	1467001..1468251	-	416	157961034	-	Spea_1206	-	sodium:dicarboxylate symporter
1205	 46.69	0	1468994..1471831	+	945	157961035	-	Spea_1207	-	peptidase M16 domain-containing protein
1206	 43.59	0	1472008..1473576	+	522	157961036	-	Spea_1208	-	glutamate--cysteine ligase
1207	 46.49	0	1473579..1474019	+	146	157961037	-	Spea_1209	-	hypothetical protein
1208	 47.09	0	1474143..1474760	+	205	157961038	-	Spea_1210	-	hypothetical protein
1209	 47.42	0	1475309..1475812	+	167	157961039	-	Spea_1211	-	phosphoribosylaminoimidazole carboxylase, catalytic subunit
1210	 43.85	0	1475962..1476579	+	205	157961040	-	Spea_1212	-	ECF subfamily RNA polymerase sigma-24 factor
1211	 46.56	0	1476569..1477135	+	188	157961041	-	Spea_1213	-	hypothetical protein
1212	 41.73	-1	1477295..1477711	-	138	157961042	-	Spea_1214	-	hypothetical protein
1213	 49.16	+1	1477930..1481208	+	1092	15796104