version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1196 44.31 0 1458872..1459117 + 81 157961026 - Spea_1198 - sodium pump decarboxylase, gamma subunit 1197 47.02 0 1459138..1460949 + 603 157961027 - Spea_1199 - pyruvate carboxylase subunit B 1198 49.87 +1 1460958..1462088 + 376 157961028 - Spea_1200 - sodium ion-translocating decarboxylase, beta subunit 1199 46.50 0 1462229..1463170 + 313 157961029 - Spea_1201 - LysR family transcriptional regulator 1200 46.88 0 1463402..1464508 + 368 157961030 - Spea_1202 - agmatine deiminase 1201 43.83 0 1464553..1465638 + 361 157961031 - Spea_1203 - extracellular solute-binding protein 1202 44.22 0 1465721..1466593 + 290 157961032 - Spea_1204 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1203 39.78 -1 1466713..1466898 - 61 157961033 - Spea_1205 - hypothetical protein 1204 47.32 0 1467001..1468251 - 416 157961034 - Spea_1206 - sodium:dicarboxylate symporter 1205 46.69 0 1468994..1471831 + 945 157961035 - Spea_1207 - peptidase M16 domain-containing protein 1206 43.59 0 1472008..1473576 + 522 157961036 - Spea_1208 - glutamate--cysteine ligase 1207 46.49 0 1473579..1474019 + 146 157961037 - Spea_1209 - hypothetical protein 1208 47.09 0 1474143..1474760 + 205 157961038 - Spea_1210 - hypothetical protein 1209 47.42 0 1475309..1475812 + 167 157961039 - Spea_1211 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 1210 43.85 0 1475962..1476579 + 205 157961040 - Spea_1212 - ECF subfamily RNA polymerase sigma-24 factor 1211 46.56 0 1476569..1477135 + 188 157961041 - Spea_1213 - hypothetical protein 1212 41.73 -1 1477295..1477711 - 138 157961042 - Spea_1214 - hypothetical protein 1213 49.16 +1 1477930..1481208 + 1092 157961043 - Spea_1215 - peptidase S41 1214 47.66 0 1481454..1482605 + 383 157961044 - Spea_1216 - secretion protein HlyD family protein 1215 46.31 0 1482595..1483665 + 356 157961045 - Spea_1217 - hypothetical protein 1216 48.21 0 1483957..1484541 + 194 157961046 - Spea_1218 - putative lipoprotein 1217 41.67 -1 1484621..1485064 - 147 157961047 - Spea_1219 - OsmC family protein 1218 46.97 0 1485341..1485868 - 175 157961048 - Spea_1220 - hypothetical protein 1219 42.51 0 1486118..1486444 - 108 157961049 - Spea_1221 - hypothetical protein 1220 46.65 0 1486448..1488091 - 547 157961050 - Spea_1222 - PepSY-associated TM helix domain-containing protein 1221 46.15 0 1488095..1488406 - 103 157961051 - Spea_1223 - hypothetical protein 1222 42.58 0 1488993..1489349 + 118 157961052 - Spea_1224 - sigma 54 modulation protein/ribosomal protein S30EA 1223 48.42 0 1489454..1491382 - 642 157961053 - Spea_1225 - potassium efflux system protein 1224 47.18 0 1491385..1492005 - 206 157961054 - Spea_1226 - NAD(P)H dehydrogenase (quinone) 1225 47.03 0 1492366..1493577 + 403 157961055 - Spea_1227 - NnrS family protein 1226 48.87 +1 1493670..1495079 + 469 157961056 - Spea_1228 - nitrite reductase (cytochrome; ammonia-forming) 1227 41.72 -1 1495344..1495832 + 162 157961057 - Spea_1229 - hypothetical protein 1228 48.34 0 1495878..1496930 + 350 157961058 - Spea_1230 - AraC family transcriptional regulator 1229 48.78 +1 1497064..1499076 + 670 157961059 - Spea_1231 - beta-lactamase domain-containing protein 1230 33.58 -2 1499742..1500542 - 266 157961060 - Spea_1232 - hypothetical protein 1231 37.32 -2 1500535..1501386 - 283 157961061 - Spea_1233 - hypothetical protein 1232 47.59 0 1502313..1504550 - 745 157961062 - Spea_1234 - acyl-CoA dehydrogenase 1233 46.89 0 1504994..1506181 - 395 157961063 - Spea_1235 - ribosome-associated GTPase 1234 44.51 0 1506793..1507320 - 175 157961064 - Spea_1236 - putative lipoprotein 1235 48.38 0 1507332..1509491 - 719 157961065 - Spea_1237 - hypothetical protein 1236 45.06 0 1509927..1511111 + 394 157961066 - Spea_1238 - glycosyl transferase group 1 1237 43.92 0 1511101..1513311 + 736 157961067 - Spea_1239 - extracellular solute-binding protein 1238 43.31 0 1513360..1514181 + 273 157961068 - Spea_1240 - hypothetical protein 1239 47.35 0 1514218..1515216 - 332 157961069 - Spea_1241 - hypothetical protein 1240 38.82 -1 1515607..1516335 + 242 157961070 - Spea_1242 - hypothetical protein 1241 40.67 -1 1516340..1517866 + 508 157961071 - Spea_1243 - diguanylate phosphodiesterase 1242 42.07 0 1518035..1518595 - 186 157961072 - Spea_1244 - CBS domain-containing protein 1243 48.29 0 1518901..1519629 + 242 157961073 - Spea_1245 - nitroreductase A 1244 47.54 0 1519846..1520373 + 175 157961074 - Spea_1246 - PEBP family protein 1245 44.44 0 1520438..1521247 + 269 157961075 - Spea_1247 - AraC family transcriptional regulator 1246 40.64 -1 1522011..1522352 + 113 157961076 - Spea_1248 - alkylphosphonate utilization operon protein PhnA 1247 41.57 -1 1522829..1523641 - 270 157961077 - Spea_1249 - AraC family transcriptional regulator 1248 41.39 -1 1523743..1524276 + 177 157961078 - Spea_1250 - alkylhydroperoxidase 1249 38.36 -2 1524295..1524732 + 145 157961079 - Spea_1251 - hypothetical protein 1250 33.62 -2 1524818..1525516 - 232 157961080 - Spea_1252 - hypothetical protein 1251 35.14 -2 1525654..1527147 + 497 157961081 - Spea_1253 - hypothetical protein 1252 37.48 -2 1527312..1527938 + 208 157961082 - Spea_1254 - transposase 1253 39.75 -1 1527993..1528553 - 186 157961083 - Spea_1255 - integrase family protein 1254 44.69 0 1528687..1529100 - 137 157961084 - Spea_1256 - hypothetical protein 1255 50.29 +1 1529279..1529620 - 113 157961085 - Spea_1257 - hypothetical protein 1256 46.01 0 1529734..1530096 - 120 157961086 - Spea_1258 - hypothetical protein 1257 45.07 0 1530156..1530632 - 158 157961087 - Spea_1259 - DNA repair protein RadC 1258 40.69 -1 1530827..1531030 + 67 157961088 - Spea_1260 - phage transcriptional regulator, AlpA 1259 45.21 0 1531543..1531761 - 72 157961089 - Spea_1261 - hypothetical protein 1260 39.93 -1 1532360..1533223 - 287 157961090 - Spea_1262 - hypothetical protein 1261 42.88 0 1533379..1534656 + 425 157961091 - Spea_1263 - hypothetical protein 1262 42.11 0 1534646..1535215 + 189 157961092 - Spea_1264 - hypothetical protein 1263 41.10 -1 1535209..1538001 + 930 157961093 - Spea_1265 - hypothetical protein 1264 45.39 0 1537998..1538876 + 292 157961094 - Spea_1266 - hypothetical protein 1265 40.61 -1 1539298..1540548 + 416 157961095 - Spea_1267 - hypothetical protein 1266 42.49 0 1540535..1542358 + 607 157961096 - Spea_1268 - hypothetical protein 1267 41.22 -1 1542400..1545645 + 1081 157961097 - Spea_1269 - helicase domain-containing protein 1268 42.42 0 1546309..1547529 + 406 157961098 - Spea_1270 - DNA-cytosine methyltransferase 1269 45.73 0 1547568..1551101 + 1177 157961099 - Spea_1271 - helicase domain-containing protein 1270 44.63 0 1551112..1555173 + 1353 157961100 - Spea_1272 - hypothetical protein 1271 47.13 0 1555239..1558805 + 1188 157961101 - Spea_1273 - helicase domain-containing protein 1272 45.45 0 1558802..1560625 + 607 157961102 - Spea_1274 - hypothetical protein 1273 45.00 0 1560622..1561461 + 279 157961103 - Spea_1275 - hypothetical protein 1274 39.13 -1 1561552..1562637 + 361 157961104 - Spea_1276 - hypothetical protein 1275 36.87 -2 1562630..1563025 + 131 157961105 - Spea_1277 - hypothetical protein 1276 35.33 -2 1563144..1563494 - 116 157961106 - Spea_1278 - hypothetical protein 1277 37.25 -2 1563727..1564083 - 118 157961107 - Spea_1279 - XRE family transcriptional regulator 1278 38.99 -1 1564202..1564696 + 164 157961108 - Spea_1280 - hypothetical protein 1279 46.39 0 1564741..1565973 - 410 157961109 - Spea_1281 - integrase family protein 1280 42.42 0 1566605..1567099 - 164 157961110 - Spea_1282 - SsrA-binding protein 1281 43.52 0 1567293..1567724 + 143 157961111 - Spea_1283 - cyclase/dehydrase 1282 44.14 0 1567721..1568053 + 110 157961112 - Spea_1284 - hypothetical protein 1283 41.62 -1 1568161..1568655 - 164 157961113 - Spea_1285 - SmpA/OmlA domain-containing protein 1284 48.26 0 1569121..1569924 + 267 157961114 - Spea_1286 - uroporphyrin-III C/tetrapyrrole methyltransferase 1285 48.48 +1 1570060..1570224 + 54 157961115 - Spea_1287 - hypothetical protein 1286 39.91 -1 1570480..1570692 + 70 157961116 - Spea_1288 - hypothetical protein 1287 40.32 -1 1570703..1572490 + 595 157961117 - Spea_1289 - diguanylate cyclase 1288 46.97 0 1573642..1575306 + 554 157961118 - Spea_1290 - malate synthase 1289 44.11 0 1575736..1577211 + 491 157961119 - Spea_1291 - putative signal transduction protein 1290 42.59 0 1577264..1577749 - 161 157961120 - Spea_1292 - hypothetical protein 1291 44.24 0 1577807..1578631 - 274 157961121 - Spea_1293 - hypothetical protein 1292 40.09 -1 1578876..1579319 - 147 157961122 - Spea_1294 - CopG family transcriptional regulator 1293 43.95 0 1579279..1580022 - 247 157961123 - Spea_1295 - hypothetical protein 1294 38.67 -1 1580588..1580812 + 74 157961124 - Spea_1296 - hypothetical protein 1295 42.57 0 1581020..1581322 + 100 157961125 - Spea_1297 - NrfJ-related protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0