IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1192	 48.64	+1	1448117..1450696	-	859	157961022	-	Spea_1194	-	DNA mismatch repair protein
1193	 45.22	0	1451017..1452084	+	355	157961023	-	Spea_1195	-	recombinase A
1194	 45.62	0	1452516..1455143	+	875	157961024	-	Spea_1196	-	alanyl-tRNA synthetase
1195	 41.41	-1	1455613..1455810	+	65	157961025	-	Spea_1197	-	carbon storage regulator, CsrA
1196	 44.31	0	1458872..1459117	+	81	157961026	-	Spea_1198	-	sodium pump decarboxylase, gamma subunit
1197	 47.02	0	1459138..1460949	+	603	157961027	-	Spea_1199	-	pyruvate carboxylase subunit B
1198	 49.87	+1	1460958..1462088	+	376	157961028	-	Spea_1200	-	sodium ion-translocating decarboxylase, beta subunit
1199	 46.50	0	1462229..1463170	+	313	157961029	-	Spea_1201	-	LysR family transcriptional regulator
1200	 46.88	0	1463402..1464508	+	368	157961030	-	Spea_1202	-	agmatine deiminase
1201	 43.83	0	1464553..1465638	+	361	157961031	-	Spea_1203	-	extracellular solute-binding protein
1202	 44.22	0	1465721..1466593	+	290	157