IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1173	 42.40	0	1423734..1424648	+	304	157961003	-	Spea_1175	-	LysR family transcriptional regulator
1174	 43.93	0	1424789..1426411	-	540	157961004	-	Spea_1176	-	response regulator receiver protein
1175	 46.36	0	1426483..1428723	-	746	157961005	-	Spea_1177	-	Hpt sensor hybrid histidine kinase
1176	 45.85	0	1428958..1429860	+	300	157961006	-	Spea_1178	-	LysR family transcriptional regulator
1177	 41.42	-1	1429957..1430562	-	201	157961007	-	Spea_1179	-	hypothetical protein
1178	 45.13	0	1430564..1433353	-	929	157961008	-	Spea_1180	-	hybrid sensory histidine kinase BarA
1179	 46.71	0	1433451..1434788	+	445	157961009	-	Spea_1181	-	23S rRNA 5-methyluridine methyltransferase
1180	 46.20	0	1435005..1437212	+	735	157961010	-	Spea_1182	-	(p)ppGpp synthetase I, SpoT/RelA
1181	 46.89	0	1437311..1438114	+	267	157961011	-	Spea_1183	-	nucleoside triphosphate pyrophosphohydrolase
1182	 45.16	0	1438230..1439870	+	546	157961012	-	Spea_1184	-	CTP synthetase
1183	 45.83	0	1439995..1441290	+	431