IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1162	 48.55	+1	1409517..1410620	+	367	157960992	-	Spea_1164	-	3,4-dihydroxy-2-butanone 4-phosphate synthase
1163	 45.70	0	1410766..1411242	+	158	157960993	-	Spea_1165	-	6,7-dimethyl-8-ribityllumazine synthase
1164	 44.85	0	1411257..1411664	+	135	157960994	-	Spea_1166	-	transcription antitermination protein NusB
1165	 47.29	0	1411838..1412797	+	319	157960995	-	Spea_1167	-	thiamine-monophosphate kinase
1166	 48.69	+1	1412797..1413291	+	164	157960996	-	Spea_1168	-	phosphatidylglycerophosphatase A
1167	 48.13	0	1413389..1415050	-	553	157960997	-	Spea_1169	-	recombination and repair protein
1168	 42.08	0	1416201..1417217	-	338	157960998	-	Spea_1170	-	transposase IS116/IS110/IS902 family protein
1169	 36.60	-2	1417740..1420280	+	846	157960999	-	Spea_1171	-	putative transcriptional regulator
1170	 42.13	0	1421146..1421907	-	253	157961000	-	Spea_1172	-	pirin domain-containing protein
1171	 40.85	-1	1422022..1423005	-	327	157961001	-	Spea_1173	-	putative glutathione S-transferase
1172	 41.56	-1	1423068..1423517	-	149