IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1154	 49.15	+1	1399553..1400665	-	370	157960984	-	Spea_1156	-	RND family efflux transporter MFP subunit
1155	 45.24	0	1401104..1402186	-	360	157960985	-	Spea_1157	-	metallophosphoesterase
1156	 45.25	0	1402275..1403432	-	385	157960986	-	Spea_1158	-	acyltransferase 3
1157	 48.02	0	1403683..1405350	-	555	157960987	-	Spea_1159	-	putative ABC transporter ATP-binding protein
1158	 46.62	0	1405628..1406884	+	418	157960988	-	Spea_1160	-	glycine hydroxymethyltransferase
1159	 47.11	0	1407071..1407520	+	149	157960989	-	Spea_1161	-	transcriptional regulator NrdR
1160	 51.25	+1	1407589..1408710	+	373	157960990	-	Spea_1162	-	riboflavin biosynthesis protein RibD
1161	 48.05	0	1408714..1409379	+	221	157960991	-	Spea_1163	-	riboflavin synthase subunit alpha
1162	 48.55	+1	1409517..1410620	+	367	157960992	-	Spea_1164	-	3,4-dihydroxy-2-butanone 4-phosphate synthase
1163	 45.70	0	1410766..1411242	+	158	157960993	-	Spea_1165	-	6,7-dimethyl-8-ribityllumazine synthase
1164	 44.85	0	1411257..1411664	+	135