IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1150	 47.87	0	1393696..1394844	-	382	157960980	-	Spea_1152	-	iron-containing alcohol dehydrogenase
1151	 40.09	-1	1394863..1395291	-	142	157960981	-	Spea_1153	-	hypothetical protein
1152	 46.62	0	1395486..1395959	-	157	157960982	-	Spea_1154	-	hypothetical protein
1153	 47.96	0	1396442..1399552	-	1036	157960983	-	Spea_1155	-	acriflavin resistance protein
1154	 49.15	+1	1399553..1400665	-	370	157960984	-	Spea_1156	-	RND family efflux transporter MFP subunit
1155	 45.24	0	1401104..1402186	-	360	157960985	-	Spea_1157	-	metallophosphoesterase
1156	 45.25	0	1402275..1403432	-	385	157960986	-	Spea_1158	-	acyltransferase 3
1157	 48.02	0	1403683..1405350	-	555	157960987	-	Spea_1159	-	putative ABC transporter ATP-binding protein
1158	 46.62	0	1405628..1406884	+	418	157960988	-	Spea_1160	-	glycine hydroxymethyltransferase
1159	 47.11	0	1407071..1407520	+	149	157960989	-	Spea_1161	-	transcriptional regulator NrdR
1160	 51.25	+1	1407589..1408710	+	373	157960990